Model info
| Transcription factor | ZNF436 (GeneCards) | ||||||||
| Model | ZN436_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 24 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | KCMdGGARGRCTTCCTGGAGGAGG | ||||||||
| Best auROC (human) | 0.984 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 485 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF180-like factors {2.3.3.58} | ||||||||
| HGNC | HGNC:20814 | ||||||||
| EntrezGene | GeneID:80818 (SSTAR profile) | ||||||||
| UniProt ID | ZN436_HUMAN | ||||||||
| UniProt AC | Q9C0F3 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF436 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF436 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 27.0 | 38.0 | 57.0 | 363.0 |
| 02 | 10.0 | 415.0 | 18.0 | 42.0 |
| 03 | 258.0 | 154.0 | 13.0 | 60.0 |
| 04 | 146.0 | 47.0 | 226.0 | 66.0 |
| 05 | 42.0 | 9.0 | 422.0 | 12.0 |
| 06 | 12.0 | 1.0 | 470.0 | 2.0 |
| 07 | 412.0 | 24.0 | 32.0 | 17.0 |
| 08 | 250.0 | 6.0 | 222.0 | 7.0 |
| 09 | 20.0 | 3.0 | 460.0 | 2.0 |
| 10 | 81.0 | 29.0 | 366.0 | 9.0 |
| 11 | 0.0 | 485.0 | 0.0 | 0.0 |
| 12 | 10.0 | 12.0 | 5.0 | 458.0 |
| 13 | 5.0 | 27.0 | 41.0 | 412.0 |
| 14 | 0.0 | 476.0 | 1.0 | 8.0 |
| 15 | 35.0 | 409.0 | 5.0 | 36.0 |
| 16 | 16.0 | 51.0 | 8.0 | 410.0 |
| 17 | 26.0 | 0.0 | 447.0 | 12.0 |
| 18 | 17.0 | 7.0 | 449.0 | 12.0 |
| 19 | 462.0 | 2.0 | 8.0 | 13.0 |
| 20 | 57.0 | 0.0 | 428.0 | 0.0 |
| 21 | 5.0 | 1.0 | 478.0 | 1.0 |
| 22 | 442.0 | 17.0 | 6.0 | 20.0 |
| 23 | 77.0 | 0.0 | 408.0 | 0.0 |
| 24 | 14.0 | 1.0 | 464.0 | 6.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.459 | -1.133 | -0.741 | 1.088 |
| 02 | -2.364 | 1.221 | -1.838 | -1.037 |
| 03 | 0.748 | 0.236 | -2.133 | -0.691 |
| 04 | 0.184 | -0.928 | 0.617 | -0.598 |
| 05 | -1.037 | -2.455 | 1.238 | -2.204 |
| 06 | -2.204 | -3.876 | 1.345 | -3.545 |
| 07 | 1.214 | -1.57 | -1.298 | -1.89 |
| 08 | 0.717 | -2.79 | 0.599 | -2.665 |
| 09 | -1.74 | -3.296 | 1.324 | -3.545 |
| 10 | -0.397 | -1.391 | 1.096 | -2.455 |
| 11 | -4.375 | 1.377 | -4.375 | -4.375 |
| 12 | -2.364 | -2.204 | -2.932 | 1.32 |
| 13 | -2.932 | -1.459 | -1.06 | 1.214 |
| 14 | -4.375 | 1.358 | -3.876 | -2.554 |
| 15 | -1.212 | 1.207 | -2.932 | -1.185 |
| 16 | -1.946 | -0.849 | -2.554 | 1.209 |
| 17 | -1.495 | -4.375 | 1.295 | -2.204 |
| 18 | -1.89 | -2.665 | 1.3 | -2.204 |
| 19 | 1.328 | -3.545 | -2.554 | -2.133 |
| 20 | -0.741 | -4.375 | 1.252 | -4.375 |
| 21 | -2.932 | -3.876 | 1.362 | -3.876 |
| 22 | 1.284 | -1.89 | -2.79 | -1.74 |
| 23 | -0.447 | -4.375 | 1.205 | -4.375 |
| 24 | -2.067 | -3.876 | 1.333 | -2.79 |