We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF449
(GeneCards)
ModelZN449_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusndGGTTGGGCTbn
Best auROC (human)0.941
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words392
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:21039
EntrezGeneGeneID:203523
(SSTAR profile)
UniProt IDZN449_HUMAN
UniProt ACQ6P9G9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.52331
0.0005 8.099419999999999
0.0001 13.39983
GTEx tissue expression atlas ZNF449 expression
ReMap ChIP-seq dataset list ZNF449 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.07.034.036.033.016.011.071.07.019.07.058.07.014.018.029.0
022.00.061.01.011.01.031.013.03.03.059.05.01.00.0187.06.0
030.00.017.00.00.00.04.00.03.03.0323.09.00.01.024.00.0
043.00.00.00.00.02.00.02.03.088.00.0277.00.03.00.06.0
051.01.00.04.01.01.011.080.00.00.00.00.012.04.09.0260.0
060.00.014.00.00.00.06.00.00.00.020.00.00.00.0344.00.0
070.00.00.00.00.00.00.00.00.00.0384.00.00.00.00.00.0
080.00.00.00.00.00.00.00.03.027.0349.05.00.00.00.00.0
090.03.00.00.00.027.00.00.01.0344.03.01.00.05.00.00.0
100.00.00.01.029.06.015.0329.00.01.00.02.00.00.00.01.0
111.010.05.013.01.02.00.04.01.07.03.04.03.075.0104.0151.0
122.01.03.00.031.021.010.032.040.012.037.023.014.044.052.062.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.339-1.1960.3440.40.314-0.398-0.7621.074-1.196-0.23-1.1960.873-1.196-0.528-0.2830.187
02-2.33-4.1830.924-2.877-0.762-2.8770.252-0.6-1.978-1.9780.89-1.512-2.877-4.1832.04-1.342
03-4.183-4.183-0.339-4.183-4.183-4.183-1.718-4.183-1.978-1.9782.585-0.956-4.183-2.8770.0-4.183
04-1.978-4.183-4.183-4.183-4.183-2.33-4.183-2.33-1.9781.288-4.1832.432-4.183-1.978-4.183-1.342
05-2.877-2.877-4.183-1.718-2.877-2.877-0.7621.193-4.183-4.183-4.183-4.183-0.678-1.718-0.9562.369
06-4.183-4.183-0.528-4.183-4.183-4.183-1.342-4.183-4.183-4.183-0.179-4.183-4.183-4.1832.648-4.183
07-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.1832.758-4.183-4.183-4.183-4.183-4.183
08-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.183-1.9780.1162.663-1.512-4.183-4.183-4.183-4.183
09-4.183-1.978-4.183-4.183-4.1830.116-4.183-4.183-2.8772.648-1.978-2.877-4.183-1.512-4.183-4.183
10-4.183-4.183-4.183-2.8770.187-1.342-0.4612.604-4.183-2.877-4.183-2.33-4.183-4.183-4.183-2.877
11-2.877-0.854-1.512-0.6-2.877-2.33-4.183-1.718-2.877-1.196-1.978-1.718-1.9781.1291.4551.826
12-2.33-2.877-1.978-4.1830.252-0.131-0.8540.2840.505-0.6780.427-0.042-0.5280.5990.7650.94