Check the newest release v13
Model info
Transcription factorZNF449
(GeneCards)
ModelZN449_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusndGGTTGGGCTbn
Best auROC (human)0.941
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words392
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:21039
EntrezGeneGeneID:203523
(SSTAR profile)
UniProt IDZN449_HUMAN
UniProt ACQ6P9G9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.52331
0.0005 8.099419999999999
0.0001 13.39983
GTEx tissue expression atlas ZNF449 expression
ReMap ChIP-seq dataset list ZNF449 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0117.07.034.036.033.016.011.071.07.019.07.058.07.014.018.029.0
022.00.061.01.011.01.031.013.03.03.059.05.01.00.0187.06.0
030.00.017.00.00.00.04.00.03.03.0323.09.00.01.024.00.0
043.00.00.00.00.02.00.02.03.088.00.0277.00.03.00.06.0
051.01.00.04.01.01.011.080.00.00.00.00.012.04.09.0260.0
060.00.014.00.00.00.06.00.00.00.020.00.00.00.0344.00.0
070.00.00.00.00.00.00.00.00.00.0384.00.00.00.00.00.0
080.00.00.00.00.00.00.00.03.027.0349.05.00.00.00.00.0
090.03.00.00.00.027.00.00.01.0344.03.01.00.05.00.00.0
100.00.00.01.029.06.015.0329.00.01.00.02.00.00.00.01.0
111.010.05.013.01.02.00.04.01.07.03.04.03.075.0104.0151.0
122.01.03.00.031.021.010.032.040.012.037.023.014.044.052.062.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.339-1.1960.3440.40.314-0.398-0.7621.074-1.196-0.23-1.1960.873-1.196-0.528-0.2830.187
02-2.33-4.1830.924-2.877-0.762-2.8770.252-0.6-1.978-1.9780.89-1.512-2.877-4.1832.04-1.342
03-4.183-4.183-0.339-4.183-4.183-4.183-1.718-4.183-1.978-1.9782.585-0.956-4.183-2.8770.0-4.183
04-1.978-4.183-4.183-4.183-4.183-2.33-4.183-2.33-1.9781.288-4.1832.432-4.183-1.978-4.183-1.342
05-2.877-2.877-4.183-1.718-2.877-2.877-0.7621.193-4.183-4.183-4.183-4.183-0.678-1.718-0.9562.369
06-4.183-4.183-0.528-4.183-4.183-4.183-1.342-4.183-4.183-4.183-0.179-4.183-4.183-4.1832.648-4.183
07-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.1832.758-4.183-4.183-4.183-4.183-4.183
08-4.183-4.183-4.183-4.183-4.183-4.183-4.183-4.183-1.9780.1162.663-1.512-4.183-4.183-4.183-4.183
09-4.183-1.978-4.183-4.183-4.1830.116-4.183-4.183-2.8772.648-1.978-2.877-4.183-1.512-4.183-4.183
10-4.183-4.183-4.183-2.8770.187-1.342-0.4612.604-4.183-2.877-4.183-2.33-4.183-4.183-4.183-2.877
11-2.877-0.854-1.512-0.6-2.877-2.33-4.183-1.718-2.877-1.196-1.978-1.718-1.9781.1291.4551.826
12-2.33-2.877-1.978-4.1830.252-0.131-0.8540.2840.505-0.6780.427-0.042-0.5280.5990.7650.94