Model info
| Transcription factor | ZNF449 (GeneCards) | ||||||||
| Model | ZN449_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dGGYTGGGCWb | ||||||||
| Best auROC (human) | 0.938 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:21039 | ||||||||
| EntrezGene | GeneID:203523 (SSTAR profile) | ||||||||
| UniProt ID | ZN449_HUMAN | ||||||||
| UniProt AC | Q6P9G9 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF449 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF449 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 87.0 | 70.0 | 97.0 | 246.0 |
| 02 | 28.0 | 5.0 | 430.0 | 37.0 |
| 03 | 26.0 | 9.0 | 442.0 | 23.0 |
| 04 | 20.0 | 141.0 | 3.0 | 336.0 |
| 05 | 18.0 | 6.0 | 24.0 | 452.0 |
| 06 | 1.0 | 0.0 | 497.0 | 2.0 |
| 07 | 5.0 | 1.0 | 491.0 | 3.0 |
| 08 | 23.0 | 56.0 | 410.0 | 11.0 |
| 09 | 14.0 | 472.0 | 4.0 | 10.0 |
| 10 | 59.0 | 17.0 | 29.0 | 395.0 |
| 11 | 12.0 | 139.0 | 130.0 | 219.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.357 | -0.57 | -0.25 | 0.671 |
| 02 | -1.454 | -2.961 | 1.227 | -1.189 |
| 03 | -1.525 | -2.484 | 1.254 | -1.64 |
| 04 | -1.77 | 0.119 | -3.325 | 0.981 |
| 05 | -1.868 | -2.819 | -1.6 | 1.276 |
| 06 | -3.903 | -4.4 | 1.371 | -3.573 |
| 07 | -2.961 | -3.903 | 1.359 | -3.325 |
| 08 | -1.64 | -0.788 | 1.179 | -2.311 |
| 09 | -2.096 | 1.32 | -3.126 | -2.394 |
| 10 | -0.737 | -1.92 | -1.421 | 1.142 |
| 11 | -2.234 | 0.105 | 0.039 | 0.555 |