We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF449
(GeneCards)
ModelZN449_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length11
Quality
C
Motif rank
0
ConsensusdGGYTGGGCWb
Best auROC (human)0.938
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:21039
EntrezGeneGeneID:203523
(SSTAR profile)
UniProt IDZN449_HUMAN
UniProt ACQ6P9G9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.1812249999999995
0.0005 5.255889999999999
0.0001 7.483560000000001
GTEx tissue expression atlas ZNF449 expression
ReMap ChIP-seq dataset list ZNF449 datasets
Motifs in JASPAR
PCM
ACGT
0187.070.097.0246.0
0228.05.0430.037.0
0326.09.0442.023.0
0420.0141.03.0336.0
0518.06.024.0452.0
061.00.0497.02.0
075.01.0491.03.0
0823.056.0410.011.0
0914.0472.04.010.0
1059.017.029.0395.0
1112.0139.0130.0219.0
PWM
ACGT
01-0.357-0.57-0.250.671
02-1.454-2.9611.227-1.189
03-1.525-2.4841.254-1.64
04-1.770.119-3.3250.981
05-1.868-2.819-1.61.276
06-3.903-4.41.371-3.573
07-2.961-3.9031.359-3.325
08-1.64-0.7881.179-2.311
09-2.0961.32-3.126-2.394
10-0.737-1.92-1.4211.142
11-2.2340.1050.0390.555