Model info
| Transcription factor | ZNF528 (GeneCards) | ||||||||
| Model | ZN528_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 20 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | nnvRRGGAAGYCATTYCTbd | ||||||||
| Best auROC (human) | 0.82 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 371 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:29384 | ||||||||
| EntrezGene | GeneID:84436 (SSTAR profile) | ||||||||
| UniProt ID | ZN528_HUMAN | ||||||||
| UniProt AC | Q3MIS6 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF528 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF528 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 76.0 | 175.0 | 60.0 | 60.0 |
| 02 | 76.0 | 163.0 | 66.0 | 66.0 |
| 03 | 103.0 | 169.0 | 57.0 | 42.0 |
| 04 | 265.0 | 20.0 | 65.0 | 21.0 |
| 05 | 62.0 | 10.0 | 271.0 | 28.0 |
| 06 | 17.0 | 1.0 | 352.0 | 1.0 |
| 07 | 22.0 | 1.0 | 348.0 | 0.0 |
| 08 | 361.0 | 5.0 | 3.0 | 2.0 |
| 09 | 339.0 | 5.0 | 24.0 | 3.0 |
| 10 | 1.0 | 2.0 | 360.0 | 8.0 |
| 11 | 17.0 | 199.0 | 29.0 | 126.0 |
| 12 | 54.0 | 310.0 | 3.0 | 4.0 |
| 13 | 329.0 | 10.0 | 24.0 | 8.0 |
| 14 | 8.0 | 54.0 | 8.0 | 301.0 |
| 15 | 8.0 | 48.0 | 8.0 | 307.0 |
| 16 | 2.0 | 56.0 | 54.0 | 259.0 |
| 17 | 4.0 | 353.0 | 2.0 | 12.0 |
| 18 | 13.0 | 65.0 | 6.0 | 287.0 |
| 19 | 34.0 | 101.0 | 173.0 | 63.0 |
| 20 | 197.0 | 49.0 | 61.0 | 64.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.196 | 0.627 | -0.427 | -0.427 |
| 02 | -0.196 | 0.557 | -0.334 | -0.334 |
| 03 | 0.103 | 0.593 | -0.477 | -0.773 |
| 04 | 1.04 | -1.479 | -0.349 | -1.433 |
| 05 | -0.395 | -2.105 | 1.062 | -1.162 |
| 06 | -1.629 | -3.638 | 1.322 | -3.638 |
| 07 | -1.39 | -3.638 | 1.311 | -4.154 |
| 08 | 1.347 | -2.677 | -3.046 | -3.299 |
| 09 | 1.285 | -2.677 | -1.308 | -3.046 |
| 10 | -3.638 | -3.299 | 1.344 | -2.297 |
| 11 | -1.629 | 0.755 | -1.129 | 0.302 |
| 12 | -0.53 | 1.196 | -3.046 | -2.845 |
| 13 | 1.255 | -2.105 | -1.308 | -2.297 |
| 14 | -2.297 | -0.53 | -2.297 | 1.166 |
| 15 | -2.297 | -0.644 | -2.297 | 1.186 |
| 16 | -3.299 | -0.494 | -0.53 | 1.017 |
| 17 | -2.845 | 1.325 | -3.299 | -1.945 |
| 18 | -1.873 | -0.349 | -2.534 | 1.119 |
| 19 | -0.977 | 0.084 | 0.616 | -0.379 |
| 20 | 0.745 | -0.624 | -0.411 | -0.364 |