Check the newest release v13
Model info
Transcription factorZNF554
(GeneCards)
ModelZN554_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
C
Motif rank
0
ConsensusndRChGRGYCRndbRRdbdvYdn
Best auROC (human)0.88
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words507
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:26629
EntrezGeneGeneID:115196
(SSTAR profile)
UniProt IDZN554_HUMAN
UniProt ACQ86TJ5
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 7.906910000000001
0.0005 9.74841
0.0001 13.63121
GTEx tissue expression atlas ZNF554 expression
ReMap ChIP-seq dataset list ZNF554 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0125.011.034.013.055.019.015.079.061.012.031.042.026.06.032.039.0
0254.010.097.06.011.011.020.06.022.019.060.011.022.011.0130.010.0
038.074.01.026.03.043.01.04.010.0270.07.020.04.022.02.05.0
042.09.06.08.0152.062.035.0160.03.04.00.04.09.02.033.011.0
0515.012.0132.07.012.09.046.010.01.05.060.08.02.010.0167.04.0
0614.00.012.04.030.01.04.01.0283.04.0111.07.06.00.023.00.0
0736.02.0294.01.02.01.02.00.025.017.0105.03.01.00.09.02.0
081.018.00.045.01.00.00.019.02.0267.016.0125.00.02.01.03.0
090.04.00.00.04.0278.00.05.00.016.00.01.02.0186.00.04.0
100.01.03.02.0370.029.051.034.00.00.00.00.01.02.03.04.0
1163.0103.081.0124.03.07.05.017.04.026.014.013.05.011.014.010.0
1218.09.042.06.035.021.025.066.021.026.060.07.025.038.079.022.0
136.016.012.065.010.011.019.054.016.042.021.0127.013.016.038.034.0
1415.01.020.09.052.01.011.021.044.05.027.014.0101.09.0155.015.0
1538.013.0151.010.03.08.05.00.013.015.0175.010.09.03.042.05.0
1613.01.020.029.09.013.05.012.066.028.0170.0109.05.03.08.09.0
176.012.055.020.06.016.04.019.026.018.064.095.018.015.096.030.0
183.06.022.025.020.09.03.029.040.027.043.0109.010.014.074.066.0
1922.013.030.08.032.09.07.08.034.022.069.017.0108.011.098.012.0
2013.0165.012.06.018.020.05.012.025.0122.021.036.02.026.013.04.0
2111.013.019.015.057.036.023.0217.09.013.017.012.06.09.022.021.0
2217.013.034.019.021.017.03.030.015.020.031.015.085.051.087.042.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.22-1.0220.083-0.860.56-0.49-0.7210.920.663-0.938-0.0080.293-0.181-1.60.0230.219
020.542-1.1141.124-1.6-1.022-1.022-0.439-1.6-0.346-0.490.646-1.022-0.346-1.0221.416-1.114
03-1.3280.855-3.126-0.181-2.2340.316-3.126-1.975-1.1142.145-1.454-0.439-1.975-0.346-2.584-1.77
04-2.584-1.215-1.6-1.3281.5720.6790.1121.623-2.234-1.975-4.4-1.975-1.215-2.5840.054-1.022
05-0.721-0.9381.431-1.454-0.938-1.2150.383-1.114-3.126-1.770.646-1.328-2.584-1.1141.666-1.975
06-0.788-4.4-0.938-1.975-0.04-3.126-1.975-3.1262.192-1.9751.259-1.454-1.6-4.4-0.302-4.4
070.14-2.5842.231-3.126-2.584-3.126-2.584-4.4-0.22-0.5991.203-2.234-3.126-4.4-1.215-2.584
08-3.126-0.543-4.40.361-3.126-4.4-4.4-0.49-2.5842.134-0.6581.377-4.4-2.584-3.126-2.234
09-4.4-1.975-4.4-4.4-1.9752.175-4.4-1.77-4.4-0.658-4.4-3.126-2.5841.773-4.4-1.975
10-4.4-3.126-2.234-2.5842.46-0.0740.4850.083-4.4-4.4-4.4-4.4-3.126-2.584-2.234-1.975
110.6951.1840.9451.369-2.234-1.454-1.77-0.599-1.975-0.181-0.788-0.86-1.77-1.022-0.788-1.114
12-0.543-1.2150.293-1.60.112-0.392-0.220.741-0.392-0.1810.646-1.454-0.220.1930.92-0.346
13-1.6-0.658-0.9380.726-1.114-1.022-0.490.542-0.6580.293-0.3921.393-0.86-0.6580.1930.083
14-0.721-3.126-0.439-1.2150.504-3.126-1.022-0.3920.339-1.77-0.144-0.7881.165-1.2151.592-0.721
150.193-0.861.565-1.114-2.234-1.328-1.77-4.4-0.86-0.7211.713-1.114-1.215-2.2340.293-1.77
16-0.86-3.126-0.439-0.074-1.215-0.86-1.77-0.9380.741-0.1081.6841.241-1.77-2.234-1.328-1.215
17-1.6-0.9380.56-0.439-1.6-0.658-1.975-0.49-0.181-0.5430.7111.104-0.543-0.7211.114-0.04
18-2.234-1.6-0.346-0.22-0.439-1.215-2.234-0.0740.244-0.1440.3161.241-1.114-0.7880.8550.741
19-0.346-0.86-0.04-1.3280.023-1.215-1.454-1.3280.083-0.3460.785-0.5991.231-1.0221.135-0.938
20-0.861.654-0.938-1.6-0.543-0.439-1.77-0.938-0.221.353-0.3920.14-2.584-0.181-0.86-1.975
21-1.022-0.86-0.49-0.7210.5950.14-0.3021.927-1.215-0.86-0.599-0.938-1.6-1.215-0.346-0.392
22-0.599-0.860.083-0.49-0.392-0.599-2.234-0.04-0.721-0.439-0.008-0.7210.9930.4851.0160.293