Model info
| Transcription factor | ZNF563 (GeneCards) | ||||||||
| Model | ZN563_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 21 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dKdnKCMbndShRKCMvChSh | ||||||||
| Best auROC (human) | 0.886 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 499 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF763-like factors {2.3.3.33} | ||||||||
| HGNC | HGNC:30498 | ||||||||
| EntrezGene | GeneID:147837 (SSTAR profile) | ||||||||
| UniProt ID | ZN563_HUMAN | ||||||||
| UniProt AC | Q8TA94 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF563 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF563 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 120.25 | 63.25 | 221.25 | 94.25 |
| 02 | 46.25 | 52.25 | 317.25 | 83.25 |
| 03 | 82.25 | 80.25 | 235.25 | 101.25 |
| 04 | 139.25 | 134.25 | 125.25 | 100.25 |
| 05 | 10.25 | 41.25 | 73.25 | 374.25 |
| 06 | 3.0 | 444.0 | 4.0 | 48.0 |
| 07 | 175.0 | 243.0 | 11.0 | 70.0 |
| 08 | 50.0 | 90.0 | 76.0 | 283.0 |
| 09 | 79.0 | 156.0 | 136.0 | 128.0 |
| 10 | 177.0 | 69.0 | 149.0 | 104.0 |
| 11 | 55.0 | 314.0 | 85.0 | 45.0 |
| 12 | 132.0 | 149.0 | 16.0 | 202.0 |
| 13 | 89.0 | 13.0 | 313.0 | 84.0 |
| 14 | 17.0 | 59.0 | 341.0 | 82.0 |
| 15 | 16.0 | 395.0 | 84.0 | 4.0 |
| 16 | 358.0 | 97.0 | 4.0 | 40.0 |
| 17 | 134.0 | 62.0 | 269.0 | 34.0 |
| 18 | 9.0 | 447.0 | 9.0 | 34.0 |
| 19 | 93.0 | 85.0 | 50.0 | 271.0 |
| 20 | 27.0 | 90.0 | 333.0 | 49.0 |
| 21 | 77.0 | 201.0 | 33.0 | 188.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.036 | -0.667 | 0.568 | -0.276 |
| 02 | -0.972 | -0.853 | 0.926 | -0.398 |
| 03 | -0.41 | -0.434 | 0.629 | -0.206 |
| 04 | 0.109 | 0.073 | 0.004 | -0.216 |
| 05 | -2.37 | -1.082 | -0.524 | 1.09 |
| 06 | -3.323 | 1.261 | -3.124 | -0.936 |
| 07 | 0.335 | 0.661 | -2.309 | -0.568 |
| 08 | -0.896 | -0.322 | -0.488 | 0.812 |
| 09 | -0.45 | 0.221 | 0.085 | 0.025 |
| 10 | 0.346 | -0.582 | 0.176 | -0.179 |
| 11 | -0.804 | 0.916 | -0.378 | -0.998 |
| 12 | 0.056 | 0.176 | -1.973 | 0.477 |
| 13 | -0.333 | -2.161 | 0.912 | -0.39 |
| 14 | -1.918 | -0.735 | 0.998 | -0.413 |
| 15 | -1.973 | 1.144 | -0.39 | -3.124 |
| 16 | 1.046 | -0.248 | -3.124 | -1.112 |
| 17 | 0.071 | -0.687 | 0.762 | -1.268 |
| 18 | -2.482 | 1.267 | -2.482 | -1.268 |
| 19 | -0.29 | -0.378 | -0.896 | 0.769 |
| 20 | -1.487 | -0.322 | 0.974 | -0.916 |
| 21 | -0.475 | 0.472 | -1.296 | 0.406 |