Model info
| Transcription factor | ZNF563 (GeneCards) | ||||||||
| Model | ZN563_HUMAN.H11MO.1.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 12 | ||||||||
| Quality | C | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | ShRKCAGCdShR | ||||||||
| Best auROC (human) | 0.863 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 500 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | ZNF763-like factors {2.3.3.33} | ||||||||
| HGNC | HGNC:30498 | ||||||||
| EntrezGene | GeneID:147837 (SSTAR profile) | ||||||||
| UniProt ID | ZN563_HUMAN | ||||||||
| UniProt AC | Q8TA94 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF563 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF563 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 64.0 | 250.0 | 170.0 | 16.0 |
| 02 | 230.0 | 137.0 | 18.0 | 115.0 |
| 03 | 168.0 | 8.0 | 281.0 | 43.0 |
| 04 | 19.0 | 33.0 | 383.0 | 65.0 |
| 05 | 16.0 | 444.0 | 25.0 | 15.0 |
| 06 | 457.0 | 2.0 | 3.0 | 38.0 |
| 07 | 48.0 | 14.0 | 408.0 | 30.0 |
| 08 | 14.0 | 431.0 | 33.0 | 22.0 |
| 09 | 257.0 | 25.0 | 61.0 | 157.0 |
| 10 | 6.0 | 253.0 | 218.0 | 23.0 |
| 11 | 250.0 | 88.0 | 12.0 | 150.0 |
| 12 | 68.0 | 42.0 | 360.0 | 30.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.658 | 0.687 | 0.304 | -1.975 |
| 02 | 0.604 | 0.091 | -1.868 | -0.082 |
| 03 | 0.293 | -2.584 | 0.803 | -1.044 |
| 04 | -1.818 | -1.298 | 1.111 | -0.643 |
| 05 | -1.975 | 1.259 | -1.561 | -2.034 |
| 06 | 1.287 | -3.573 | -3.325 | -1.163 |
| 07 | -0.938 | -2.096 | 1.174 | -1.389 |
| 08 | -2.096 | 1.229 | -1.298 | -1.681 |
| 09 | 0.714 | -1.561 | -0.705 | 0.225 |
| 10 | -2.819 | 0.699 | 0.551 | -1.64 |
| 11 | 0.687 | -0.346 | -2.234 | 0.18 |
| 12 | -0.599 | -1.067 | 1.05 | -1.389 |