We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF652
(GeneCards)
ModelZN652_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length11
Quality
D
Motif rank
0
ConsensusnRdKGGTTAAh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words236
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZNF652-like factors {2.3.3.29}
HGNCHGNC:29147
EntrezGeneGeneID:22834
(SSTAR profile)
UniProt IDZN652_HUMAN
UniProt ACQ9Y2D9
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.250515
0.0005 6.109395
0.0001 7.9239999999999995
GTEx tissue expression atlas ZNF652 expression
ReMap ChIP-seq dataset list ZNF652 datasets
Motifs in JASPAR
PCM
ACGT
01140.523.535.535.5
02173.016.024.022.0
03118.519.569.527.5
0412.7511.75187.7522.75
0524.00.0204.07.0
066.02.0221.06.0
075.08.05.0217.0
0811.254.2510.25209.25
09213.255.257.259.25
10204.759.759.7510.75
1161.044.029.0101.0
PWM
ACGT
010.859-0.883-0.489-0.489
021.065-1.242-0.863-0.945
030.69-1.0580.165-0.734
04-1.449-1.5231.146-0.913
05-0.863-3.7851.229-1.972
06-2.1-2.8831.308-2.1
07-2.245-1.859-2.2451.29
08-1.561-2.371-1.6441.254
091.273-2.207-1.943-1.734
101.232-1.688-1.688-1.602
110.037-0.282-0.6830.532