Model info
| Transcription factor | ZNF680 (GeneCards) | ||||||||
| Model | ZN680_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 20 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | YRYRhCCARGAAGAATRAGG | ||||||||
| Best auROC (human) | 0.999 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 309 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:26897 | ||||||||
| EntrezGene | GeneID:340252 (SSTAR profile) | ||||||||
| UniProt ID | ZN680_HUMAN | ||||||||
| UniProt AC | Q8NEM1 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF680 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF680 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 26.0 | 202.0 | 11.0 | 70.0 |
| 02 | 189.0 | 14.0 | 96.0 | 10.0 |
| 03 | 18.0 | 115.0 | 22.0 | 154.0 |
| 04 | 95.0 | 7.0 | 203.0 | 4.0 |
| 05 | 88.0 | 38.0 | 34.0 | 149.0 |
| 06 | 19.0 | 275.0 | 0.0 | 15.0 |
| 07 | 14.0 | 284.0 | 4.0 | 7.0 |
| 08 | 304.0 | 0.0 | 3.0 | 2.0 |
| 09 | 188.0 | 6.0 | 108.0 | 7.0 |
| 10 | 2.0 | 3.0 | 303.0 | 1.0 |
| 11 | 302.0 | 2.0 | 1.0 | 4.0 |
| 12 | 283.0 | 0.0 | 25.0 | 1.0 |
| 13 | 33.0 | 3.0 | 271.0 | 2.0 |
| 14 | 304.0 | 0.0 | 4.0 | 1.0 |
| 15 | 247.0 | 15.0 | 10.0 | 37.0 |
| 16 | 1.0 | 9.0 | 7.0 | 292.0 |
| 17 | 66.0 | 14.0 | 183.0 | 46.0 |
| 18 | 290.0 | 4.0 | 6.0 | 9.0 |
| 19 | 24.0 | 0.0 | 283.0 | 2.0 |
| 20 | 22.0 | 9.0 | 268.0 | 10.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.054 | 0.95 | -1.845 | -0.097 |
| 02 | 0.884 | -1.629 | 0.214 | -1.929 |
| 03 | -1.398 | 0.392 | -1.211 | 0.681 |
| 04 | 0.203 | -2.233 | 0.955 | -2.673 |
| 05 | 0.128 | -0.691 | -0.798 | 0.648 |
| 06 | -1.348 | 1.257 | -4.005 | -1.566 |
| 07 | -1.629 | 1.289 | -2.673 | -2.233 |
| 08 | 1.356 | -4.005 | -2.876 | -3.132 |
| 09 | 0.879 | -2.359 | 0.33 | -2.233 |
| 10 | -3.132 | -2.876 | 1.353 | -3.476 |
| 11 | 1.35 | -3.132 | -3.476 | -2.673 |
| 12 | 1.285 | -4.005 | -1.091 | -3.476 |
| 13 | -0.826 | -2.876 | 1.242 | -3.132 |
| 14 | 1.356 | -4.005 | -2.673 | -3.476 |
| 15 | 1.15 | -1.566 | -1.929 | -0.717 |
| 16 | -3.476 | -2.02 | -2.233 | 1.316 |
| 17 | -0.154 | -1.629 | 0.852 | -0.506 |
| 18 | 1.309 | -2.673 | -2.359 | -2.02 |
| 19 | -1.129 | -4.005 | 1.285 | -3.132 |
| 20 | -1.211 | -2.02 | 1.231 | -1.929 |