Model info
| Transcription factor | ZNF708 (GeneCards) | ||||||||
| Model | ZN708_HUMAN.H11MO.1.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 9 | ||||||||
| Quality | D | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | AGGYACAGM | ||||||||
| Best auROC (human) | 0.795 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 439 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:12945 | ||||||||
| EntrezGene | GeneID:7562 (SSTAR profile) | ||||||||
| UniProt ID | ZN708_HUMAN | ||||||||
| UniProt AC | P17019 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF708 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF708 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 389.0 | 1.0 | 31.0 | 18.0 |
| 02 | 6.0 | 0.0 | 408.0 | 25.0 |
| 03 | 5.0 | 26.0 | 404.0 | 4.0 |
| 04 | 27.0 | 181.0 | 8.0 | 223.0 |
| 05 | 405.0 | 11.0 | 7.0 | 16.0 |
| 06 | 6.0 | 367.0 | 19.0 | 47.0 |
| 07 | 396.0 | 3.0 | 30.0 | 10.0 |
| 08 | 3.0 | 3.0 | 427.0 | 6.0 |
| 09 | 43.0 | 349.0 | 23.0 | 24.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.256 | -3.787 | -1.23 | -1.74 |
| 02 | -2.694 | -4.293 | 1.303 | -1.434 |
| 03 | -2.837 | -1.397 | 1.293 | -3.003 |
| 04 | -1.361 | 0.495 | -2.458 | 0.702 |
| 05 | 1.296 | -2.185 | -2.569 | -1.849 |
| 06 | -2.694 | 1.198 | -1.691 | -0.83 |
| 07 | 1.273 | -3.203 | -1.261 | -2.268 |
| 08 | -3.203 | -3.203 | 1.348 | -2.694 |
| 09 | -0.916 | 1.147 | -1.512 | -1.472 |