Transcription factor | ZNF708 (GeneCards) | ||||||||
Model | ZN708_HUMAN.H11MO.1.D | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Data source | ChIP-Seq | ||||||||
Model release | HOCOMOCOv11 | ||||||||
Model length | 9 | ||||||||
Quality | D | ||||||||
Motif rank | 1 | ||||||||
Consensus | AGGYACAGM | ||||||||
Best auROC (human) | 0.795 | ||||||||
Best auROC (mouse) | |||||||||
Peak sets in benchmark (human) | 3 | ||||||||
Peak sets in benchmark (mouse) | |||||||||
Aligned words | 439 | ||||||||
TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
TF subfamily | unclassified {2.3.3.0} | ||||||||
HGNC | HGNC:12945 | ||||||||
EntrezGene | GeneID:7562 (SSTAR profile) | ||||||||
UniProt ID | ZN708_HUMAN | ||||||||
UniProt AC | P17019 (TFClass) | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
| ||||||||
GTEx tissue expression atlas | ZNF708 expression | ||||||||
ReMap ChIP-seq dataset list | ZNF708 datasets | ||||||||
Motifs in JASPAR |
A | C | G | T | |
---|---|---|---|---|
01 | 389.0 | 1.0 | 31.0 | 18.0 |
02 | 6.0 | 0.0 | 408.0 | 25.0 |
03 | 5.0 | 26.0 | 404.0 | 4.0 |
04 | 27.0 | 181.0 | 8.0 | 223.0 |
05 | 405.0 | 11.0 | 7.0 | 16.0 |
06 | 6.0 | 367.0 | 19.0 | 47.0 |
07 | 396.0 | 3.0 | 30.0 | 10.0 |
08 | 3.0 | 3.0 | 427.0 | 6.0 |
09 | 43.0 | 349.0 | 23.0 | 24.0 |
A | C | G | T | |
---|---|---|---|---|
01 | 1.256 | -3.787 | -1.23 | -1.74 |
02 | -2.694 | -4.293 | 1.303 | -1.434 |
03 | -2.837 | -1.397 | 1.293 | -3.003 |
04 | -1.361 | 0.495 | -2.458 | 0.702 |
05 | 1.296 | -2.185 | -2.569 | -1.849 |
06 | -2.694 | 1.198 | -1.691 | -0.83 |
07 | 1.273 | -3.203 | -1.261 | -2.268 |
08 | -3.203 | -3.203 | 1.348 | -2.694 |
09 | -0.916 | 1.147 | -1.512 | -1.472 |