Model info
| Transcription factor | ZNF770 (GeneCards) | ||||||||
| Model | ZN770_HUMAN.H11MO.1.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | dGGAGGCYGvR | ||||||||
| Best auROC (human) | 0.962 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 491 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| HGNC | HGNC:26061 | ||||||||
| EntrezGene | GeneID:54989 (SSTAR profile) | ||||||||
| UniProt ID | ZN770_HUMAN | ||||||||
| UniProt AC | Q6IQ21 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF770 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF770 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 119.0 | 50.0 | 206.0 | 116.0 |
| 02 | 66.0 | 8.0 | 411.0 | 6.0 |
| 03 | 1.0 | 1.0 | 489.0 | 0.0 |
| 04 | 490.0 | 0.0 | 0.0 | 1.0 |
| 05 | 1.0 | 1.0 | 488.0 | 1.0 |
| 06 | 0.0 | 1.0 | 486.0 | 4.0 |
| 07 | 2.0 | 485.0 | 1.0 | 3.0 |
| 08 | 22.0 | 156.0 | 1.0 | 312.0 |
| 09 | 59.0 | 34.0 | 389.0 | 9.0 |
| 10 | 245.0 | 52.0 | 167.0 | 27.0 |
| 11 | 82.0 | 68.0 | 316.0 | 25.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.031 | -0.88 | 0.513 | -0.056 |
| 02 | -0.61 | -2.566 | 1.2 | -2.801 |
| 03 | -3.887 | -3.887 | 1.373 | -4.385 |
| 04 | 1.375 | -4.385 | -4.385 | -3.887 |
| 05 | -3.887 | -3.887 | 1.371 | -3.887 |
| 06 | -4.385 | -3.887 | 1.367 | -3.109 |
| 07 | -3.556 | 1.365 | -3.887 | -3.308 |
| 08 | -1.664 | 0.237 | -3.887 | 0.925 |
| 09 | -0.719 | -1.252 | 1.145 | -2.467 |
| 10 | 0.685 | -0.842 | 0.305 | -1.471 |
| 11 | -0.397 | -0.581 | 0.938 | -1.544 |