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Model info
Transcription factorZNF18
(GeneCards)
ModelZNF18_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
0
ConsensusnRGTGTGAAYhbn
Best auROC (human)0.96
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words532
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:12969
EntrezGeneGeneID:7566
(SSTAR profile)
UniProt IDZNF18_HUMAN
UniProt ACP17022
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 6.536415
0.0005 8.988859999999999
0.0001 14.276129999999998
GTEx tissue expression atlas ZNF18 expression
ReMap ChIP-seq dataset list ZNF18 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0134.00.075.02.040.00.034.013.049.01.058.016.025.00.0129.08.0
020.03.0145.00.00.00.01.00.01.00.0295.00.00.00.039.00.0
030.00.00.01.00.00.00.03.08.01.00.0471.00.00.00.00.0
042.01.05.00.00.00.01.00.00.00.00.00.03.00.0472.00.0
050.00.00.05.00.00.00.01.010.01.056.0411.00.00.00.00.0
060.00.010.00.00.00.01.00.01.00.055.00.02.00.0414.01.0
073.00.00.00.00.00.00.00.0454.013.00.013.00.00.01.00.0
08368.012.045.032.010.01.01.01.01.00.00.00.011.00.00.02.0
0911.0249.061.069.00.04.00.09.03.024.03.016.00.024.04.07.0
103.03.03.05.059.080.027.0135.017.018.06.027.028.017.021.035.0
118.048.037.014.035.040.024.019.010.021.08.018.06.023.0159.014.0
1212.021.018.08.042.033.023.034.036.033.095.064.08.012.037.08.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
010.115-4.3730.9-2.5520.276-4.3730.115-0.8280.477-3.0950.645-0.626-0.188-4.3731.441-1.296
02-4.373-2.2021.557-4.373-4.373-4.373-3.095-4.373-3.095-4.3732.266-4.373-4.373-4.3730.251-4.373
03-4.373-4.373-4.373-3.095-4.373-4.373-4.373-2.202-1.296-3.095-4.3732.733-4.373-4.373-4.373-4.373
04-2.552-3.095-1.738-4.373-4.373-4.373-3.095-4.373-4.373-4.373-4.373-4.373-2.202-4.3732.736-4.373
05-4.373-4.373-4.373-1.738-4.373-4.373-4.373-3.095-1.082-3.0950.612.597-4.373-4.373-4.373-4.373
06-4.373-4.373-1.082-4.373-4.373-4.373-3.095-4.373-3.095-4.3730.592-4.373-2.552-4.3732.605-3.095
07-2.202-4.373-4.373-4.373-4.373-4.373-4.373-4.3732.697-0.828-4.373-0.828-4.373-4.373-3.095-4.373
082.487-0.9060.3930.056-1.082-3.095-3.095-3.095-3.095-4.373-4.373-4.373-0.99-4.373-4.373-2.552
09-0.992.0970.6950.818-4.373-1.944-4.373-1.183-2.202-0.228-2.202-0.626-4.373-0.228-1.944-1.423
10-2.202-2.202-2.202-1.7380.6620.965-0.1121.486-0.567-0.511-1.568-0.112-0.076-0.567-0.3590.144
11-1.2960.4570.199-0.7560.1440.276-0.228-0.458-1.082-0.359-1.296-0.511-1.568-0.271.649-0.756
12-0.906-0.359-0.511-1.2960.3250.086-0.270.1150.1720.0861.1360.743-1.296-0.9060.199-1.296