We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF41
(GeneCards)
ModelZNF41_HUMAN.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length12
Quality
C
Motif rank
1
ConsensusMAYARGGRARhv
Best auROC (human)0.854
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words500
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZFN81-like factors {2.3.3.68}
HGNCHGNC:13107
EntrezGeneGeneID:7592
(SSTAR profile)
UniProt IDZNF41_HUMAN
UniProt ACP51814
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.29652
0.0005 6.229134999999999
0.0001 8.043905
GTEx tissue expression atlas ZNF41 expression
ReMap ChIP-seq dataset list ZNF41 datasets
Motifs in JASPAR
PCM
ACGT
01142.0310.033.015.0
02407.024.068.01.0
0364.0283.019.0134.0
04352.08.0137.03.0
05379.08.089.024.0
061.04.0493.02.0
0714.012.0413.061.0
08200.01.0297.02.0
09491.00.05.04.0
10180.018.0278.024.0
11184.067.066.0183.0
12174.094.0163.069.0
PWM
ACGT
010.1260.901-1.298-2.034
021.172-1.6-0.599-3.903
03-0.6580.81-1.8180.069
041.027-2.5840.091-3.325
051.101-2.584-0.335-1.6
06-3.903-3.1261.363-3.573
07-2.096-2.2341.187-0.705
080.465-3.9030.858-3.573
091.359-4.4-2.961-3.126
100.361-1.8680.793-1.6
110.383-0.613-0.6280.377
120.327-0.2810.263-0.584