Model info
| Transcription factor | ZNF85 (GeneCards) | ||||||||
| Model | ZNF85_HUMAN.H11MO.1.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Motif rank | 1 | ||||||||
| Consensus | KGMWGbAATCYhh | ||||||||
| Best auROC (human) | 0.896 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 4 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 499 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:13160 | ||||||||
| EntrezGene | GeneID:7639 (SSTAR profile) | ||||||||
| UniProt ID | ZNF85_HUMAN | ||||||||
| UniProt AC | Q03923 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF85 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF85 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 49.0 | 24.0 | 80.0 | 346.0 |
| 02 | 103.0 | 4.0 | 385.0 | 7.0 |
| 03 | 300.0 | 168.0 | 19.0 | 12.0 |
| 04 | 251.0 | 12.0 | 24.0 | 212.0 |
| 05 | 17.0 | 1.0 | 477.0 | 4.0 |
| 06 | 46.0 | 50.0 | 185.0 | 218.0 |
| 07 | 489.0 | 6.0 | 2.0 | 2.0 |
| 08 | 437.0 | 60.0 | 2.0 | 0.0 |
| 09 | 3.0 | 20.0 | 3.0 | 473.0 |
| 10 | 11.0 | 468.0 | 8.0 | 12.0 |
| 11 | 77.0 | 78.0 | 4.0 | 340.0 |
| 12 | 58.0 | 181.0 | 57.0 | 203.0 |
| 13 | 77.0 | 168.0 | 58.0 | 196.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.916 | -1.598 | -0.437 | 1.012 |
| 02 | -0.189 | -3.124 | 1.119 | -2.692 |
| 03 | 0.87 | 0.294 | -1.816 | -2.232 |
| 04 | 0.693 | -2.232 | -1.598 | 0.525 |
| 05 | -1.918 | -3.901 | 1.332 | -3.124 |
| 06 | -0.977 | -0.896 | 0.39 | 0.553 |
| 07 | 1.357 | -2.817 | -3.571 | -3.571 |
| 08 | 1.245 | -0.719 | -3.571 | -4.398 |
| 09 | -3.323 | -1.768 | -3.323 | 1.324 |
| 10 | -2.309 | 1.313 | -2.582 | -2.232 |
| 11 | -0.475 | -0.462 | -3.124 | 0.995 |
| 12 | -0.752 | 0.368 | -0.769 | 0.482 |
| 13 | -0.475 | 0.294 | -0.752 | 0.447 |