We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZNF85
(GeneCards)
ModelZNF85_HUMAN.H11MO.1.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length13
Quality
C
Motif rank
1
ConsensusKGMWGbAATCYhh
Best auROC (human)0.896
Best auROC (mouse)
Peak sets in benchmark (human)4
Peak sets in benchmark (mouse)
Aligned words499
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:13160
EntrezGeneGeneID:7639
(SSTAR profile)
UniProt IDZNF85_HUMAN
UniProt ACQ03923
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.8423099999999994
0.0005 5.86831
0.0001 7.950715000000001
GTEx tissue expression atlas ZNF85 expression
ReMap ChIP-seq dataset list ZNF85 datasets
Motifs in JASPAR
PCM
ACGT
0149.024.080.0346.0
02103.04.0385.07.0
03300.0168.019.012.0
04251.012.024.0212.0
0517.01.0477.04.0
0646.050.0185.0218.0
07489.06.02.02.0
08437.060.02.00.0
093.020.03.0473.0
1011.0468.08.012.0
1177.078.04.0340.0
1258.0181.057.0203.0
1377.0168.058.0196.0
PWM
ACGT
01-0.916-1.598-0.4371.012
02-0.189-3.1241.119-2.692
030.870.294-1.816-2.232
040.693-2.232-1.5980.525
05-1.918-3.9011.332-3.124
06-0.977-0.8960.390.553
071.357-2.817-3.571-3.571
081.245-0.719-3.571-4.398
09-3.323-1.768-3.3231.324
10-2.3091.313-2.582-2.232
11-0.475-0.462-3.1240.995
12-0.7520.368-0.7690.482
13-0.4750.294-0.7520.447