Model info
| Transcription factor | ZNF8 (GeneCards) | ||||||||
| Model | ZNF8_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 22 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | TGTGGTAYATCCATWYARTGGA | ||||||||
| Best auROC (human) | 0.982 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 3 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 417 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers {2.3.4} | ||||||||
| TF subfamily | unclassified {2.3.4.0} | ||||||||
| HGNC | HGNC:13154 | ||||||||
| EntrezGene | GeneID:7554 (SSTAR profile) | ||||||||
| UniProt ID | ZNF8_HUMAN | ||||||||
| UniProt AC | P17098 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZNF8 expression | ||||||||
| ReMap ChIP-seq dataset list | ZNF8 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 16.0 | 22.0 | 15.0 | 364.0 |
| 02 | 63.0 | 13.0 | 338.0 | 3.0 |
| 03 | 5.0 | 13.0 | 1.0 | 398.0 |
| 04 | 1.0 | 0.0 | 414.0 | 2.0 |
| 05 | 4.0 | 1.0 | 411.0 | 1.0 |
| 06 | 8.0 | 19.0 | 2.0 | 388.0 |
| 07 | 411.0 | 3.0 | 2.0 | 1.0 |
| 08 | 8.0 | 124.0 | 6.0 | 279.0 |
| 09 | 341.0 | 9.0 | 67.0 | 0.0 |
| 10 | 14.0 | 19.0 | 10.0 | 374.0 |
| 11 | 53.0 | 345.0 | 9.0 | 10.0 |
| 12 | 6.0 | 319.0 | 0.0 | 92.0 |
| 13 | 399.0 | 4.0 | 6.0 | 8.0 |
| 14 | 7.0 | 59.0 | 15.0 | 336.0 |
| 15 | 300.0 | 15.0 | 49.0 | 53.0 |
| 16 | 33.0 | 326.0 | 9.0 | 49.0 |
| 17 | 349.0 | 44.0 | 17.0 | 7.0 |
| 18 | 318.0 | 11.0 | 70.0 | 18.0 |
| 19 | 20.0 | 29.0 | 24.0 | 344.0 |
| 20 | 39.0 | 5.0 | 359.0 | 14.0 |
| 21 | 33.0 | 7.0 | 372.0 | 5.0 |
| 22 | 385.0 | 9.0 | 16.0 | 7.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.798 | -1.504 | -1.857 | 1.24 |
| 02 | -0.494 | -1.986 | 1.166 | -3.155 |
| 03 | -2.788 | -1.986 | -3.742 | 1.329 |
| 04 | -3.742 | -4.25 | 1.368 | -3.406 |
| 05 | -2.955 | -3.742 | 1.361 | -3.742 |
| 06 | -2.409 | -1.64 | -3.406 | 1.304 |
| 07 | 1.361 | -3.155 | -3.406 | -3.742 |
| 08 | -2.409 | 0.171 | -2.645 | 0.975 |
| 09 | 1.175 | -2.309 | -0.434 | -4.25 |
| 10 | -1.92 | -1.64 | -2.218 | 1.267 |
| 11 | -0.663 | 1.187 | -2.309 | -2.218 |
| 12 | -2.645 | 1.109 | -4.25 | -0.123 |
| 13 | 1.332 | -2.955 | -2.645 | -2.409 |
| 14 | -2.52 | -0.558 | -1.857 | 1.16 |
| 15 | 1.048 | -1.857 | -0.739 | -0.663 |
| 16 | -1.12 | 1.13 | -2.309 | -0.739 |
| 17 | 1.198 | -0.843 | -1.743 | -2.52 |
| 18 | 1.106 | -2.135 | -0.391 | -1.69 |
| 19 | -1.593 | -1.243 | -1.422 | 1.184 |
| 20 | -0.96 | -2.788 | 1.226 | -1.92 |
| 21 | -1.12 | -2.52 | 1.262 | -2.788 |
| 22 | 1.296 | -2.309 | -1.798 | -2.52 |