We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZSCAN22
(GeneCards)
ModelZSC22_HUMAN.H11DI.0.C
Model typeDinucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length23
Quality
C
Motif rank
0
ConsensusnbdRdShGAbGGMGGAGGSvvnv
Best auROC (human)0.932
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words428
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:4929
EntrezGeneGeneID:342945
(SSTAR profile)
UniProt IDZSC22_HUMAN
UniProt ACP10073
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 1.26871
0.0005 3.73721
0.0001 9.03991
GTEx tissue expression atlas ZSCAN22 expression
ReMap ChIP-seq dataset list ZSCAN22 datasets
Motifs in JASPAR
PCM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
0114.011.046.014.012.036.029.035.020.025.052.017.01.08.061.03.0
0220.04.019.04.025.010.023.022.048.013.0110.017.029.09.021.010.0
0326.05.088.03.06.07.016.07.026.031.0107.09.04.07.039.03.0
0413.06.023.020.09.07.017.017.032.031.033.0154.01.05.013.03.0
0513.019.020.03.013.020.013.03.024.025.029.08.03.0177.09.05.0
0629.010.07.07.058.044.05.0134.018.031.06.016.05.03.03.08.0
075.00.0105.00.05.01.082.00.00.00.020.01.08.01.0156.00.0
0815.01.02.00.00.01.00.01.0323.01.034.05.00.00.01.00.0
0920.026.0188.0104.00.00.01.02.06.05.07.019.04.01.01.00.0
102.00.028.00.06.00.024.02.013.00.0184.00.02.01.0122.00.0
110.00.023.00.00.00.01.00.08.00.0349.01.00.00.02.00.0
122.00.04.02.00.00.00.00.0194.0136.020.025.01.00.00.00.0
1317.00.0180.00.016.01.0117.02.01.00.023.00.02.00.025.00.0
140.00.033.03.00.00.01.00.01.02.0340.02.00.00.02.00.0
150.00.00.01.00.01.00.01.0289.077.04.06.02.03.00.00.0
168.00.0281.02.08.01.066.06.01.00.03.00.00.00.08.00.0
175.00.010.02.00.01.00.00.018.06.0328.06.02.00.04.02.0
181.019.05.00.01.05.00.01.036.0209.056.041.00.04.03.03.0
199.05.023.01.071.061.075.030.010.012.034.08.010.08.022.05.0
2022.017.053.08.023.015.038.010.013.065.067.09.03.07.030.04.0
2112.06.032.011.015.021.011.057.039.053.069.027.06.04.017.04.0
228.09.050.05.020.07.046.011.038.025.051.015.013.09.071.06.0
PWM
AAACAGATCACCCGCTGAGCGGGTTATCTGTT
01-0.528-0.7620.643-0.528-0.6780.40.1870.372-0.1790.040.765-0.339-2.877-1.0690.924-1.978
02-0.179-1.718-0.23-1.7180.04-0.854-0.042-0.0860.685-0.61.51-0.3390.187-0.956-0.131-0.854
030.079-1.5121.288-1.978-1.342-1.196-0.398-1.1960.0790.2521.483-0.956-1.718-1.1960.48-1.978
04-0.6-1.342-0.042-0.179-0.956-1.196-0.339-0.3390.2840.2520.3141.846-2.877-1.512-0.6-1.978
05-0.6-0.23-0.179-1.978-0.6-0.179-0.6-1.9780.00.040.187-1.069-1.9781.985-0.956-1.512
060.187-0.854-1.196-1.1960.8730.599-1.5121.707-0.2830.252-1.342-0.398-1.512-1.978-1.978-1.069
07-1.512-4.1831.464-4.183-1.512-2.8771.218-4.183-4.183-4.183-0.179-2.877-1.069-2.8771.859-4.183
08-0.461-2.877-2.33-4.183-4.183-2.877-4.183-2.8772.585-2.8770.344-1.512-4.183-4.183-2.877-4.183
09-0.1790.0792.0451.455-4.183-4.183-2.877-2.33-1.342-1.512-1.196-0.23-1.718-2.877-2.877-4.183
10-2.33-4.1830.152-4.183-1.342-4.1830.0-2.33-0.6-4.1832.024-4.183-2.33-2.8771.614-4.183
11-4.183-4.183-0.042-4.183-4.183-4.183-2.877-4.183-1.069-4.1832.663-2.877-4.183-4.183-2.33-4.183
12-2.33-4.183-1.718-2.33-4.183-4.183-4.183-4.1832.0761.722-0.1790.04-2.877-4.183-4.183-4.183
13-0.339-4.1832.002-4.183-0.398-2.8771.572-2.33-2.877-4.183-0.042-4.183-2.33-4.1830.04-4.183
14-4.183-4.1830.314-1.978-4.183-4.183-2.877-4.183-2.877-2.332.637-2.33-4.183-4.183-2.33-4.183
15-4.183-4.183-4.183-2.877-4.183-2.877-4.183-2.8772.4741.155-1.718-1.342-2.33-1.978-4.183-4.183
16-1.069-4.1832.446-2.33-1.069-2.8771.002-1.342-2.877-4.183-1.978-4.183-4.183-4.183-1.069-4.183
17-1.512-4.183-0.854-2.33-4.183-2.877-4.183-4.183-0.283-1.3422.601-1.342-2.33-4.183-1.718-2.33
18-2.877-0.23-1.512-4.183-2.877-1.512-4.183-2.8770.42.1510.8390.529-4.183-1.718-1.978-1.978
19-0.956-1.512-0.042-2.8771.0740.9241.1290.22-0.854-0.6780.344-1.069-0.854-1.069-0.086-1.512
20-0.086-0.3390.784-1.069-0.042-0.4610.454-0.854-0.60.9871.017-0.956-1.978-1.1960.22-1.718
21-0.678-1.3420.284-0.762-0.461-0.131-0.7620.8560.480.7841.0460.116-1.342-1.718-0.339-1.718
22-1.069-0.9560.726-1.512-0.179-1.1960.643-0.7620.4540.040.746-0.461-0.6-0.9561.074-1.342