We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZSCAN22
(GeneCards)
ModelZSC22_HUMAN.H11MO.0.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceChIP-Seq
Model releaseHOCOMOCOv11
Model length16
Quality
C
Motif rank
0
ConsensusdRbShGAdGGMGGMGG
Best auROC (human)0.932
Best auROC (mouse)
Peak sets in benchmark (human)2
Peak sets in benchmark (mouse)
Aligned words476
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyunclassified {2.3.3.0}
HGNCHGNC:4929
EntrezGeneGeneID:342945
(SSTAR profile)
UniProt IDZSC22_HUMAN
UniProt ACP10073
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.7812099999999997
0.0005 3.90101
0.0001 6.25801
GTEx tissue expression atlas ZSCAN22 expression
ReMap ChIP-seq dataset list ZSCAN22 datasets
Motifs in JASPAR
PCM
ACGT
01145.048.0208.075.0
0290.054.0306.026.0
0364.072.0125.0215.0
0459.0301.086.030.0
05152.086.044.0194.0
0629.04.0441.02.0
07410.07.048.011.0
0865.030.0260.0121.0
0940.02.0430.04.0
1012.04.0456.04.0
11258.0148.042.028.0
1257.04.0409.06.0
139.02.0456.09.0
14340.0112.010.014.0
1531.03.0436.06.0
1633.023.0403.017.0
PWM
ACGT
010.195-0.8890.553-0.454
02-0.275-0.7750.937-1.476
03-0.609-0.4940.0490.586
04-0.6890.92-0.32-1.341
050.242-0.32-0.9730.484
06-1.373-3.081.301-3.527
071.228-2.647-0.889-2.263
08-0.594-1.3410.7750.016
09-1.065-3.5271.275-3.08
10-2.186-3.081.334-3.08
110.7670.216-1.018-1.406
12-0.722-3.081.225-2.772
13-2.437-3.5271.334-2.437
141.041-0.06-2.346-2.048
15-1.309-3.2791.289-2.772
16-1.25-1.5921.211-1.872