Model info
| Transcription factor | ZSCAN22 (GeneCards) | ||||||||
| Model | ZSC22_HUMAN.H11MO.0.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Data source | ChIP-Seq | ||||||||
| Model release | HOCOMOCOv11 | ||||||||
| Model length | 16 | ||||||||
| Quality | C | ||||||||
| Motif rank | 0 | ||||||||
| Consensus | dRbShGAdGGMGGMGG | ||||||||
| Best auROC (human) | 0.932 | ||||||||
| Best auROC (mouse) | |||||||||
| Peak sets in benchmark (human) | 2 | ||||||||
| Peak sets in benchmark (mouse) | |||||||||
| Aligned words | 476 | ||||||||
| TF family | More than 3 adjacent zinc finger factors {2.3.3} | ||||||||
| TF subfamily | unclassified {2.3.3.0} | ||||||||
| HGNC | HGNC:4929 | ||||||||
| EntrezGene | GeneID:342945 (SSTAR profile) | ||||||||
| UniProt ID | ZSC22_HUMAN | ||||||||
| UniProt AC | P10073 (TFClass) | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
| ||||||||
| GTEx tissue expression atlas | ZSCAN22 expression | ||||||||
| ReMap ChIP-seq dataset list | ZSCAN22 datasets | ||||||||
| Motifs in JASPAR |
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 145.0 | 48.0 | 208.0 | 75.0 |
| 02 | 90.0 | 54.0 | 306.0 | 26.0 |
| 03 | 64.0 | 72.0 | 125.0 | 215.0 |
| 04 | 59.0 | 301.0 | 86.0 | 30.0 |
| 05 | 152.0 | 86.0 | 44.0 | 194.0 |
| 06 | 29.0 | 4.0 | 441.0 | 2.0 |
| 07 | 410.0 | 7.0 | 48.0 | 11.0 |
| 08 | 65.0 | 30.0 | 260.0 | 121.0 |
| 09 | 40.0 | 2.0 | 430.0 | 4.0 |
| 10 | 12.0 | 4.0 | 456.0 | 4.0 |
| 11 | 258.0 | 148.0 | 42.0 | 28.0 |
| 12 | 57.0 | 4.0 | 409.0 | 6.0 |
| 13 | 9.0 | 2.0 | 456.0 | 9.0 |
| 14 | 340.0 | 112.0 | 10.0 | 14.0 |
| 15 | 31.0 | 3.0 | 436.0 | 6.0 |
| 16 | 33.0 | 23.0 | 403.0 | 17.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.195 | -0.889 | 0.553 | -0.454 |
| 02 | -0.275 | -0.775 | 0.937 | -1.476 |
| 03 | -0.609 | -0.494 | 0.049 | 0.586 |
| 04 | -0.689 | 0.92 | -0.32 | -1.341 |
| 05 | 0.242 | -0.32 | -0.973 | 0.484 |
| 06 | -1.373 | -3.08 | 1.301 | -3.527 |
| 07 | 1.228 | -2.647 | -0.889 | -2.263 |
| 08 | -0.594 | -1.341 | 0.775 | 0.016 |
| 09 | -1.065 | -3.527 | 1.275 | -3.08 |
| 10 | -2.186 | -3.08 | 1.334 | -3.08 |
| 11 | 0.767 | 0.216 | -1.018 | -1.406 |
| 12 | -0.722 | -3.08 | 1.225 | -2.772 |
| 13 | -2.437 | -3.527 | 1.334 | -2.437 |
| 14 | 1.041 | -0.06 | -2.346 | -2.048 |
| 15 | -1.309 | -3.279 | 1.289 | -2.772 |
| 16 | -1.25 | -1.592 | 1.211 | -1.872 |