We, Russian scientists of the autosome team, are depressed by the dire events caused by Russian military actions in Ukraine.
We express our condolences to all affected people and sincerely hope for a prompt transition to peace.
Model info
Transcription factorZSCAN4
(GeneCards)
ModelZSCA4_HUMAN.H11MO.0.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
Data sourceHT-SELEX
Model releaseHOCOMOCOv10
Model length12
Quality
D
Motif rank
0
ConsensusAGKGTGTGCAhh
Best auROC (human)
Best auROC (mouse)
Peak sets in benchmark (human)
Peak sets in benchmark (mouse)
Aligned words1158
TF familyMore than 3 adjacent zinc finger factors {2.3.3}
TF subfamilyZSCAN5-like zinc finger factors {2.3.3.5}
HGNCHGNC:23709
EntrezGeneGeneID:201516
(SSTAR profile)
UniProt IDZSCA4_HUMAN
UniProt ACQ8NAM6
(TFClass)
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -3.57081
0.0005 -0.5507599999999999
0.0001 1.82079
GTEx tissue expression atlas ZSCAN4 expression
ReMap ChIP-seq dataset list ZSCAN4 datasets
Motifs in JASPAR
MA1155.1 (ZSCAN4; Homo sapiens)
PCM
ACGT
011156.00.00.00.0
020.00.01156.00.0
030.0141.0188.0827.0
040.00.01156.00.0
050.00.00.01156.0
060.00.01156.00.0
070.00.00.01156.0
080.00.01156.00.0
090.01148.00.08.0
101144.750.758.751.75
11204.5538.5194.5218.5
12275.5213.5105.5561.5
PWM
ACGT
011.382-5.105-5.105-5.105
02-5.105-5.1051.382-5.105
03-5.105-0.711-0.4271.047
04-5.105-5.1051.382-5.105
05-5.105-5.105-5.1051.382
06-5.105-5.1051.382-5.105
07-5.105-5.105-5.1051.382
08-5.105-5.1051.382-5.105
09-5.1051.375-5.105-3.394
101.372-4.751-3.32-4.416
11-0.3430.62-0.393-0.278
12-0.048-0.301-0.9970.661