PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NANOG_HUMAN.H11MO.0.A |  |
HUMAN:NANOG | 17 | A | 0 | nbhWTTSWnATGYWRWb | HOCOMOCOv11 | ChIP-Seq | 0.92 | 0.928 | 15 | 38 | 499 | NK-related factors{3.1.2} | NANOG{3.1.2.12} | 20857 | 79923 | NANOG_HUMAN | Q9H9S0 | |
| NANOG_HUMAN.H11MO.1.B |  |
HUMAN:NANOG | 11 | B | 1 | vRSCCATYAvn | HOCOMOCOv11 | ChIP-Seq | 0.769 | 0.825 | 15 | 38 | 500 | NK-related factors{3.1.2} | NANOG{3.1.2.12} | 20857 | 79923 | NANOG_HUMAN | Q9H9S0 | |
| NANOG_HUMAN.H11DI.0.A |  |
HUMAN:NANOG | 19 | A | 0 | nbbYWTTSWnWTKYWRWbn | HOCOMOCOv11 | ChIP-Seq | 0.939 | 0.943 | 15 | 38 | 497 | NK-related factors{3.1.2} | NANOG{3.1.2.12} | 20857 | 79923 | NANOG_HUMAN | Q9H9S0 | |
| NANOG_MOUSE.H11MO.0.A |  |
MOUSE:Nanog | 17 | A | 0 | bbYWTTSWnWTKYWRAd | HOCOMOCOv11 | ChIP-Seq | 0.914 | 0.939 | 15 | 38 | 500 | NK-related factors{3.1.2} | NANOG{3.1.2.12} | 1919200 | 71950 | NANOG_MOUSE | Q80Z64 | |
| NANOG_MOUSE.H11MO.1.A |  |
MOUSE:Nanog | 11 | A | 1 | vRSCCATYAvn | HOCOMOCOv11 | ChIP-Seq | 0.769 | 0.825 | 15 | 38 | 500 | NK-related factors{3.1.2} | NANOG{3.1.2.12} | 1919200 | 71950 | NANOG_MOUSE | Q80Z64 | |
| NANOG_MOUSE.H11DI.0.A |  |
MOUSE:Nanog | 22 | A | 0 | nbbYWTTvWnWTKYWRAdndnn | HOCOMOCOv10 | ChIP-Seq | 0.924 | 0.944 | 15 | 38 | 513 | NK-related factors{3.1.2} | NANOG{3.1.2.12} | 1919200 | 71950 | NANOG_MOUSE | Q80Z64 |