PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SOX11_HUMAN.H11MO.0.D |  |
HUMAN:SOX11 | 16 | D | 0 | RACAMTRhMATTGTYb | HOCOMOCOv10 | HT-SELEX | 220 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 11191 | 6664 | SOX11_HUMAN | P35716 | |||||
| SOX4_HUMAN.H11MO.0.B |  |
HUMAN:SOX4 | 12 | B | 0 | bYCTTTGTYYbb | HOCOMOCOv11 | ChIP-Seq | 0.64 | 0.978 | 2 | 7 | 500 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 11200 | 6659 | SOX4_HUMAN | Q06945 | |
| SOX4_HUMAN.H11DI.0.B |  |
HUMAN:SOX4 | 13 | B | 0 | bbYCTTTGTYYbb | HOCOMOCOv11 | ChIP-Seq | 0.67 | 0.976 | 2 | 7 | 350 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 11200 | 6659 | SOX4_HUMAN | Q06945 | |
| SOX4_MOUSE.H11MO.0.A |  |
MOUSE:Sox4 | 12 | A | 0 | bYCTTTGTYYbb | HOCOMOCOv11 | ChIP-Seq | 0.64 | 0.978 | 2 | 7 | 500 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 98366 | 20677 | SOX4_MOUSE | Q06831 | |
| SOX4_MOUSE.H11DI.0.A |  |
MOUSE:Sox4 | 13 | A | 0 | nbYCTTTGTYYbb | HOCOMOCOv11 | ChIP-Seq | 0.637 | 0.981 | 2 | 7 | 500 | SOX-related factors{4.1.1} | Group C{4.1.1.3} | 98366 | 20677 | SOX4_MOUSE | Q06831 |