PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| VSX1_HUMAN.H11MO.0.D |  |
HUMAN:VSX1 | 14 | D | 0 | TAATTARhhhhhhd | HOCOMOCOv10 | HT-SELEX | 6598 | Paired-related HD factors{3.1.3} | VSX{3.1.3.28} | 12723 | 30813 | VSX1_HUMAN | Q9NZR4 | |||||
| VSX2_HUMAN.H11MO.0.D |  |
HUMAN:VSX2 | 12 | D | 0 | hTAATTAGCYdn | HOCOMOCOv11 | ChIP-Seq | 0.996 | 3 | 504 | Paired-related HD factors{3.1.3} | VSX{3.1.3.28} | 1975 | 338917 | VSX2_HUMAN | P58304 | |||
| VSX2_MOUSE.H11MO.0.C |  |
MOUSE:Vsx2 | 12 | C | 0 | hTAATTAGCYdn | HOCOMOCOv11 | ChIP-Seq | 0.996 | 3 | 504 | Paired-related HD factors{3.1.3} | VSX{3.1.3.28} | 88401 | 12677 | VSX2_MOUSE | Q61412 | |||
| VSX2_MOUSE.H11DI.0.C |  |
MOUSE:Vsx2 | 13 | C | 0 | nhTAATTAGCYdn | HOCOMOCOv11 | ChIP-Seq | 0.996 | 3 | 524 | Paired-related HD factors{3.1.3} | VSX{3.1.3.28} | 88401 | 12677 | VSX2_MOUSE | Q61412 |