PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDX1_HUMAN.H11MO.0.A |  |
HUMAN:PDX1 | 9 | A | 0 | TGAYWRAKK | HOCOMOCOv11 | ChIP-Seq | 0.96 | 0.814 | 10 | 4 | 494 | HOX-related factors{3.1.1} | PDX{3.1.1.15} | 6107 | 3651 | PDX1_HUMAN | P52945 | |
| PDX1_HUMAN.H11MO.1.A |  |
HUMAN:PDX1 | 9 | A | 1 | dYTAATKRb | HOCOMOCOv11 | ChIP-Seq | 0.824 | 0.827 | 10 | 4 | 504 | HOX-related factors{3.1.1} | PDX{3.1.1.15} | 6107 | 3651 | PDX1_HUMAN | P52945 | |
| PDX1_HUMAN.H11DI.0.A |  |
HUMAN:PDX1 | 12 | A | 0 | dTGATWRAKKdb | HOCOMOCOv11 | ChIP-Seq | 0.976 | 0.814 | 10 | 4 | 377 | HOX-related factors{3.1.1} | PDX{3.1.1.15} | 6107 | 3651 | PDX1_HUMAN | P52945 | |
| PDX1_MOUSE.H11MO.0.B |  |
MOUSE:Pdx1 | 9 | B | 0 | vYTAATGRb | HOCOMOCOv11 | ChIP-Seq | 0.752 | 0.895 | 10 | 4 | 500 | HOX-related factors{3.1.1} | PDX{3.1.1.15} | 102851 | 18609 | PDX1_MOUSE | P52946 | |
| PDX1_MOUSE.H11DI.0.A |  |
MOUSE:Pdx1 | 12 | A | 0 | dTGAYWRAKKdn | HOCOMOCOv11 | ChIP-Seq | 0.949 | 0.905 | 10 | 4 | 503 | HOX-related factors{3.1.1} | PDX{3.1.1.15} | 102851 | 18609 | PDX1_MOUSE | P52946 |