PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NKX23_HUMAN.H11MO.0.D |  |
HUMAN:NKX2-3 | 11 | D | 0 | ndbAAGTGKbh | HOCOMOCOv10 | HT-SELEX | 1260 | NK-related factors{3.1.2} | NK-4{3.1.2.17} | 7836 | 159296 | NKX23_HUMAN | Q8TAU0 | |||||
| NKX25_HUMAN.H11MO.0.B |  |
HUMAN:NKX2-5 | 8 | B | 0 | bbRAGWGv | HOCOMOCOv11 | ChIP-Seq | 0.697 | 0.86 | 2 | 7 | 499 | NK-related factors{3.1.2} | NK-4{3.1.2.17} | 2488 | 1482 | NKX25_HUMAN | P52952 | |
| NKX25_HUMAN.H11DI.0.B |  |
HUMAN:NKX2-5 | 10 | B | 0 | nhdGAGWGbn | HOCOMOCOv11 | ChIP-Seq | 0.749 | 0.889 | 2 | 7 | 518 | NK-related factors{3.1.2} | NK-4{3.1.2.17} | 2488 | 1482 | NKX25_HUMAN | P52952 | |
| NKX25_MOUSE.H11MO.0.A |  |
MOUSE:Nkx2-5 | 10 | A | 0 | nbYbRAGWGS | HOCOMOCOv11 | ChIP-Seq | 0.612 | 0.896 | 2 | 7 | 500 | NK-related factors{3.1.2} | NK-4{3.1.2.17} | 97350 | 18091 | NKX25_MOUSE | P42582 | |
| NKX25_MOUSE.H11DI.0.B |  |
MOUSE:Nkx2-5 | 11 | B | 0 | nbhKGAGTGbn | HOCOMOCOv11 | ChIP-Seq | 0.662 | 0.882 | 2 | 7 | 525 | NK-related factors{3.1.2} | NK-4{3.1.2.17} | 97350 | 18091 | NKX25_MOUSE | P42582 |