PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PITX1_HUMAN.H11MO.0.D |  |
HUMAN:PITX1 | 9 | D | 0 | vRGGMTTWd | HOCOMOCOv11 | ChIP-Seq | 0.544 | 0.885 | 2 | 4 | 500 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 9004 | 5307 | PITX1_HUMAN | P78337 | |
| PITX2_HUMAN.H11MO.0.D |  |
HUMAN:PITX2 | 10 | D | 0 | YKGGATTWvh | HOCOMOCOv9 | Integrative | 17 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 9005 | 5308 | PITX2_HUMAN | Q99697 | |||||
| PITX3_HUMAN.H11MO.0.D |  |
HUMAN:PITX3 | 18 | D | 0 | dddRdWWhvdvGGATTAd | HOCOMOCOv10 | HT-SELEX | 7586 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 9006 | 5309 | PITX3_HUMAN | O75364 | |||||
| PITX1_HUMAN.H11DI.0.D |  |
HUMAN:PITX1 | 10 | D | 0 | ndGGMTTWdn | HOCOMOCOv11 | ChIP-Seq | 0.546 | 0.884 | 2 | 4 | 500 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 9004 | 5307 | PITX1_HUMAN | P78337 | |
| PITX1_MOUSE.H11MO.0.C |  |
MOUSE:Pitx1 | 10 | C | 0 | dRGGATTAdv | HOCOMOCOv11 | ChIP-Seq | 0.529 | 0.875 | 2 | 4 | 196 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 107374 | 18740 | PITX1_MOUSE | P70314 | |
| PITX2_MOUSE.H11MO.0.D |  |
MOUSE:Pitx2 | 10 | D | 0 | YKGGATTWvh | HOCOMOCOv9 | Integrative | 17 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 109340 | 18741 | PITX2_MOUSE | P97474 | |||||
| PITX1_MOUSE.H11DI.0.C |  |
MOUSE:Pitx1 | 11 | C | 0 | nvdGGMTTAdn | HOCOMOCOv11 | ChIP-Seq | 0.523 | 0.887 | 2 | 4 | 390 | Paired-related HD factors{3.1.3} | PITX{3.1.3.19} | 107374 | 18740 | PITX1_MOUSE | P70314 |