PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PAX4_HUMAN.H11MO.0.D |  |
HUMAN:PAX4 | 12 | D | 0 | hdhhTAATKMdh | HOCOMOCOv10 | HT-SELEX | 934 | Paired plus homeo domain{3.2.1} | PAX-4/6{3.2.1.2} | 8618 | 5078 | PAX4_HUMAN | O43316 | |||||
| PAX6_HUMAN.H11MO.0.C |  |
HUMAN:PAX6 | 12 | C | 0 | WYMYRCWTSRnT | HOCOMOCOv11 | ChIP-Seq | 0.749 | 0.734 | 6 | 8 | 500 | Paired plus homeo domain{3.2.1} | PAX-4/6{3.2.1.2} | 8620 | 5080 | PAX6_HUMAN | P26367 | |
| PAX6_HUMAN.H11DI.0.C |  |
HUMAN:PAX6 | 15 | C | 0 | hKYMYGCWTSRvYKv | HOCOMOCOv11 | ChIP-Seq | 0.68 | 0.791 | 6 | 8 | 504 | Paired plus homeo domain{3.2.1} | PAX-4/6{3.2.1.2} | 8620 | 5080 | PAX6_HUMAN | P26367 | |
| PAX6_MOUSE.H11MO.0.C |  |
MOUSE:Pax6 | 12 | C | 0 | WYMYRCWTSRnT | HOCOMOCOv11 | ChIP-Seq | 0.749 | 0.734 | 6 | 8 | 500 | Paired plus homeo domain{3.2.1} | PAX-4/6{3.2.1.2} | 97490 | 18508 | PAX6_MOUSE | P63015 | |
| PAX6_MOUSE.H11DI.0.B |  |
MOUSE:Pax6 | 15 | B | 0 | hKYvYRChTSRnYRv | HOCOMOCOv11 | ChIP-Seq | 0.606 | 0.8 | 6 | 8 | 500 | Paired plus homeo domain{3.2.1} | PAX-4/6{3.2.1.2} | 97490 | 18508 | PAX6_MOUSE | P63015 |