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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
PAX2_HUMAN.H11MO.0.D HUMAN:PAX2 18 D 0 vhbnvdTSAhRvdYGAYW HOCOMOCOv9 Integrative 50 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 8616 5076 PAX2_HUMAN Q02962
PAX5_HUMAN.H11MO.0.A HUMAN:PAX5 21 A 0 vbvdGdKCARSvRRSCRdGAC HOCOMOCOv11 ChIP-Seq 0.922 0.823 32 8 202 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 8619 5079 PAX5_HUMAN Q02548
PAX8_HUMAN.H11MO.0.D HUMAN:PAX8 14 D 0 bYvAYYSRvSYRKd HOCOMOCOv9 Integrative 37 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 8622 7849 PAX8_HUMAN Q06710
PAX5_HUMAN.H11DI.0.A HUMAN:PAX5 23 A 0 nnnvdRvKCRvYvRWGCRWGRMn HOCOMOCOv11 ChIP-Seq 0.961 0.899 32 8 503 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 8619 5079 PAX5_HUMAN Q02548
PAX2_MOUSE.H11MO.0.D MOUSE:Pax2 18 D 0 vhbnvdTSAhRvdYGAYW HOCOMOCOv9 Integrative 50 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 97486 18504 PAX2_MOUSE P32114
PAX5_MOUSE.H11MO.0.A MOUSE:Pax5 19 A 0 vdRnKYRvYvRdGCRdRRM HOCOMOCOv11 ChIP-Seq 0.944 0.861 32 8 500 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 97489 18507 PAX5_MOUSE Q02650
PAX8_MOUSE.H11MO.0.D MOUSE:Pax8 14 D 0 bYvAYYSRvSYRKd HOCOMOCOv9 Integrative 37 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 97492 18510 PAX8_MOUSE Q00288
PAX5_MOUSE.H11DI.0.A MOUSE:Pax5 20 A 0 nddbYvvvvRRSCRKGRMbn HOCOMOCOv11 ChIP-Seq 0.947 0.927 32 8 401 Paired domain only{3.2.2} PAX-2-like factors (partial homeobox){3.2.2.2} 97489 18507 PAX5_MOUSE Q02650