PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NFKB1_HUMAN.H11MO.1.B |  |
HUMAN:NFKB1 | 11 | B | 1 | GGGAAAbYCCC | HOCOMOCOv11 | ChIP-Seq | 0.726 | 0.953 | 7 | 16 | 503 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 7794 | 4790 | NFKB1_HUMAN | P19838 | |
| NFKB2_HUMAN.H11MO.0.B |  |
HUMAN:NFKB2 | 11 | B | 0 | KGGRAAdYCCC | HOCOMOCOv11 | ChIP-Seq | 0.977 | 4 | 500 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 7795 | 4791 | NFKB2_HUMAN | Q00653 | |||
| NFKB1_HUMAN.H11MO.0.A RETRACTED!!! |  |
HUMAN:NFKB1 | 8 | A | 0 | RGGGAARd | HOCOMOCOv11 | ChIP-Seq | 0.94 | 0.897 | 7 | 16 | 265 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 7794 | 4790 | NFKB1_HUMAN | P19838 | |
| NFKB1_HUMAN.H11DI.1.B |  |
HUMAN:NFKB1 | 14 | B | 1 | ndGGGRAAbhCCCh | HOCOMOCOv11 | ChIP-Seq | 0.787 | 0.965 | 7 | 16 | 528 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 7794 | 4790 | NFKB1_HUMAN | P19838 | |
| NFKB2_HUMAN.H11DI.0.B |  |
HUMAN:NFKB2 | 14 | B | 0 | nKGGRAAdYCCCdn | HOCOMOCOv11 | ChIP-Seq | 0.986 | 4 | 511 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 7795 | 4791 | NFKB2_HUMAN | Q00653 | |||
| NFKB1_HUMAN.H11DI.0.A RETRACTED!!! |  |
HUMAN:NFKB1 | 14 | A | 0 | nWGGGRAAbhSMSh | HOCOMOCOv11 | ChIP-Seq | 0.867 | 0.958 | 7 | 16 | 319 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 7794 | 4790 | NFKB1_HUMAN | P19838 | |
| NFKB1_MOUSE.H11MO.0.A |  |
MOUSE:Nfkb1 | 11 | A | 0 | GGGAAAbYCCC | HOCOMOCOv11 | ChIP-Seq | 0.726 | 0.953 | 7 | 16 | 503 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 97312 | 18033 | NFKB1_MOUSE | P25799 | |
| NFKB2_MOUSE.H11MO.0.C |  |
MOUSE:Nfkb2 | 11 | C | 0 | KGGRAAdYCCC | HOCOMOCOv11 | ChIP-Seq | 0.977 | 4 | 500 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 1099800 | 18034 | NFKB2_MOUSE | Q9WTK5 | |||
| NFKB1_MOUSE.H11DI.0.A |  |
MOUSE:Nfkb1 | 14 | A | 0 | ndGGGRAAbhCCCh | HOCOMOCOv11 | ChIP-Seq | 0.787 | 0.965 | 7 | 16 | 528 | NF-kappaB-related factors{6.1.1} | NF-kappaB p50 subunit-like factors{6.1.1.1} | 97312 | 18033 | NFKB1_MOUSE | P25799 |