PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GFI1B_HUMAN.H11MO.0.A |  |
HUMAN:GFI1B | 10 | A | 0 | RYWSWGATTK | HOCOMOCOv11 | ChIP-Seq | 0.891 | 0.887 | 3 | 24 | 503 | More than 3 adjacent zinc finger factors{2.3.3} | GFI1 factors{2.3.3.21} | 4238 | 8328 | GFI1B_HUMAN | Q5VTD9 | |
| GFI1_HUMAN.H11MO.0.C |  |
HUMAN:GFI1 | 10 | C | 0 | RShSWGATTb | HOCOMOCOv9 | Integrative | 152 | More than 3 adjacent zinc finger factors{2.3.3} | GFI1 factors{2.3.3.21} | 4237 | 2672 | GFI1_HUMAN | Q99684 | |||||
| GFI1B_HUMAN.H11DI.0.A |  |
HUMAN:GFI1B | 14 | A | 0 | nKYWbWGRTTTnhn | HOCOMOCOv11 | ChIP-Seq | 0.887 | 0.891 | 3 | 24 | 537 | More than 3 adjacent zinc finger factors{2.3.3} | GFI1 factors{2.3.3.21} | 4238 | 8328 | GFI1B_HUMAN | Q5VTD9 | |
| GFI1B_MOUSE.H11MO.0.A |  |
MOUSE:Gfi1b | 10 | A | 0 | dYWSTGRTTK | HOCOMOCOv11 | ChIP-Seq | 0.862 | 0.888 | 3 | 24 | 503 | More than 3 adjacent zinc finger factors{2.3.3} | GFI1 factors{2.3.3.21} | 1276578 | 14582 | GFI1B_MOUSE | O70237 | |
| GFI1_MOUSE.H11MO.0.C |  |
MOUSE:Gfi1 | 10 | C | 0 | RShSWGATTb | HOCOMOCOv9 | Integrative | 152 | More than 3 adjacent zinc finger factors{2.3.3} | GFI1 factors{2.3.3.21} | 103170 | 14581 | GFI1_MOUSE | P70338 | |||||
| GFI1B_MOUSE.H11DI.0.A |  |
MOUSE:Gfi1b | 12 | A | 0 | dKCWSWGATTKn | HOCOMOCOv11 | ChIP-Seq | 0.881 | 0.899 | 3 | 24 | 524 | More than 3 adjacent zinc finger factors{2.3.3} | GFI1 factors{2.3.3.21} | 1276578 | 14582 | GFI1B_MOUSE | O70237 |