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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
TYY1_HUMAN.H11MO.0.A HUMAN:YY1 12 A 0 MAARATGGCKSM HOCOMOCOv11 ChIP-Seq 0.981 0.989 69 72 453 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 12856 7528 TYY1_HUMAN P25490
TYY2_HUMAN.H11MO.0.D HUMAN:YY2 11 D 0 WhvATGGCGGn HOCOMOCOv10 HT-SELEX 943 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 31684 404281 TYY2_HUMAN O15391
ZFP42_HUMAN.H11MO.0.A HUMAN:ZFP42 12 A 0 vRShGCCATYTY HOCOMOCOv11 ChIP-Seq 0.909 0.8 3 2 500 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 30949 132625 ZFP42_HUMAN Q96MM3
TYY1_HUMAN.H11DI.0.A HUMAN:YY1 22 A 0 nvAAvATGGCSSCbvbvvbvbn HOCOMOCOv10 ChIP-Seq 0.993 0.997 69 72 505 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 12856 7528 TYY1_HUMAN P25490
ZFP42_HUMAN.H11DI.0.A HUMAN:ZFP42 15 A 0 bRvhKCCATTYbdbd HOCOMOCOv11 ChIP-Seq 0.938 0.84 3 2 343 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 30949 132625 ZFP42_HUMAN Q96MM3
TYY1_MOUSE.H11MO.0.A MOUSE:Yy1 12 A 0 vAAvATGGCSSM HOCOMOCOv11 ChIP-Seq 0.984 0.993 69 72 500 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 99150 22632 TYY1_MOUSE Q00899
ZFP42_MOUSE.H11MO.0.A MOUSE:Zfp42 12 A 0 vRShGCCATYTY HOCOMOCOv11 ChIP-Seq 0.909 0.8 3 2 500 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 99187 22702 ZFP42_MOUSE P22227
TYY1_MOUSE.H11DI.0.A MOUSE:Yy1 22 A 0 nvAAvATGGCSSCbvbvvbvbn HOCOMOCOv10 ChIP-Seq 0.993 0.997 69 72 505 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 99150 22632 TYY1_MOUSE Q00899
ZFP42_MOUSE.H11DI.0.A MOUSE:Zfp42 15 A 0 bRvhKCCATTYbdbd HOCOMOCOv11 ChIP-Seq 0.938 0.84 3 2 343 More than 3 adjacent zinc finger factors{2.3.3} YY1-like factors{2.3.3.9} 99187 22702 ZFP42_MOUSE P22227