PWMs for transcription factors
Model |
LOGO |
Transcription factor |
Model length |
Quality |
Model rank |
Consensus |
Model release |
Data source |
Best auROC (human) |
Best auROC (mouse) |
Peak sets in benchmark (human) |
Peak sets in benchmark (mouse) |
Aligned words |
TF family |
TF subfamily |
HGNC |
MGI |
EntrezGene |
UniProt ID |
UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LHX3_HUMAN.H11MO.0.C |  |
LHX3 (GeneCards) |
13 | C | 0 | ddAWTTAATTAdh | HOCOMOCOv9 | Integrative | 72 | HD-LIM factors {3.1.5} (TFClass) | Lhx-3-like factors {3.1.5.4} (TFClass) | 6595 | 8022 (SSTAR) |
LHX3_HUMAN | Q9UBR4 (TFClass) |
|||||
| LHX4_HUMAN.H11MO.0.D |  |
LHX4 (GeneCards) |
11 | D | 0 | dnvYTAATKdn | HOCOMOCOv10 | HT-SELEX | 1423 | HD-LIM factors {3.1.5} (TFClass) | Lhx-3-like factors {3.1.5.4} (TFClass) | 21734 | 89884 (SSTAR) |
LHX4_HUMAN | Q969G2 (TFClass) |
|||||
| LHX3_MOUSE.H11MO.0.C |  |
Lhx3 | 9 | C | 0 | nbTAATKRv | HOCOMOCOv11 | ChIP-Seq | 0.940 | 2 | 500 | HD-LIM factors {3.1.5} (TFClass) | Lhx-3-like factors {3.1.5.4} (TFClass) | 102673 | 16871 (SSTAR) |
LHX3_MOUSE | P50481 (TFClass) |
|||
| LHX3_MOUSE.H11DI.0.C |  |
Lhx3 | 14 | C | 0 | hhdhnbTAATKRvd | HOCOMOCOv11 | ChIP-Seq | 0.951 | 2 | 387 | HD-LIM factors {3.1.5} (TFClass) | Lhx-3-like factors {3.1.5.4} (TFClass) | 102673 | 16871 (SSTAR) |
LHX3_MOUSE | P50481 (TFClass) |