PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SOX17_HUMAN.H11MO.0.C |  |
HUMAN:SOX17 | 11 | C | 0 | bCCATYKTbbb | HOCOMOCOv11 | ChIP-Seq | 0.835 | 4 | 500 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 18122 | 64321 | SOX17_HUMAN | Q9H6I2 | |||
| SOX18_HUMAN.H11MO.0.D |  |
HUMAN:SOX18 | 19 | D | 0 | SMWhnMATTGTYbWnnYYC | HOCOMOCOv9 | Integrative | 8 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 11194 | 54345 | SOX18_HUMAN | P35713 | |||||
| SOX7_HUMAN.H11MO.0.D |  |
HUMAN:SOX7 | 16 | D | 0 | RACAMTGhMATTGTYh | HOCOMOCOv10 | HT-SELEX | 700 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 18196 | 83595 | SOX7_HUMAN | Q9BT81 | |||||
| SOX17_HUMAN.H11DI.0.C |  |
HUMAN:SOX17 | 13 | C | 0 | bvnbCCATYKTdn | HOCOMOCOv11 | ChIP-Seq | 0.856 | 4 | 510 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 18122 | 64321 | SOX17_HUMAN | Q9H6I2 | |||
| SOX17_MOUSE.H11MO.0.D |  |
MOUSE:Sox17 | 11 | D | 0 | bCCATYKTbbb | HOCOMOCOv11 | ChIP-Seq | 0.835 | 4 | 500 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 107543 | 20671 | SOX17_MOUSE | Q61473 | |||
| SOX18_MOUSE.H11MO.0.D |  |
MOUSE:Sox18 | 19 | D | 0 | SMWhnMATTGTYbWnnYYC | HOCOMOCOv9 | Integrative | 8 | SOX-related factors{4.1.1} | Group F{4.1.1.6} | 103559 | 20672 | SOX18_MOUSE | P43680 |