PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NR1I2_HUMAN.H11MO.0.C |  |
HUMAN:NR1I2 | 19 | C | 0 | ddRRSTYARnnRAGKTCAb | HOCOMOCOv9 | Integrative | 29 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 7968 | 8856 | NR1I2_HUMAN | O75469 | |||||
| NR1I2_HUMAN.H11MO.1.D |  |
HUMAN:NR1I2 | 8 | D | 1 | dAGKTCAb | HOCOMOCOv9 | Integrative | 45 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 7968 | 8856 | NR1I2_HUMAN | O75469 | |||||
| NR1I3_HUMAN.H11MO.0.C |  |
HUMAN:NR1I3 | 18 | C | 0 | RRGSTCAvvvRAGKWYRd | HOCOMOCOv9 | Integrative | 28 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 7969 | 9970 | NR1I3_HUMAN | Q14994 | |||||
| NR1I3_HUMAN.H11MO.1.D |  |
HUMAN:NR1I3 | 8 | D | 1 | RAGTTCAb | HOCOMOCOv9 | Integrative | 33 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 7969 | 9970 | NR1I3_HUMAN | Q14994 | |||||
| VDR_HUMAN.H11MO.0.A |  |
HUMAN:VDR | 16 | A | 0 | vRGKKSAbhRRGKKYR | HOCOMOCOv11 | ChIP-Seq | 0.943 | 0.932 | 48 | 30 | 500 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 12679 | 7421 | VDR_HUMAN | P11473 | |
| VDR_HUMAN.H11MO.1.A |  |
HUMAN:VDR | 9 | A | 1 | hRRGKTCAb | HOCOMOCOv11 | ChIP-Seq | 0.877 | 0.821 | 48 | 30 | 500 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 12679 | 7421 | VDR_HUMAN | P11473 | |
| VDR_HUMAN.H11DI.0.A |  |
HUMAN:VDR | 18 | A | 0 | nvRGGKSAbhRRGKKYRn | HOCOMOCOv11 | ChIP-Seq | 0.95 | 0.939 | 48 | 30 | 419 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 12679 | 7421 | VDR_HUMAN | P11473 | |
| NR1I2_MOUSE.H11MO.0.C |  |
MOUSE:Nr1i2 | 19 | C | 0 | ddRRSTYARnnRAGKTCAb | HOCOMOCOv9 | Integrative | 29 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 1337040 | 18171 | NR1I2_MOUSE | O54915 | |||||
| NR1I2_MOUSE.H11MO.1.D |  |
MOUSE:Nr1i2 | 8 | D | 1 | dAGKTCAb | HOCOMOCOv9 | Integrative | 45 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 1337040 | 18171 | NR1I2_MOUSE | O54915 | |||||
| NR1I3_MOUSE.H11MO.0.C |  |
MOUSE:Nr1i3 | 18 | C | 0 | RRGSTCAvvvRAGKWYRd | HOCOMOCOv9 | Integrative | 28 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 1346307 | 12355 | NR1I3_MOUSE | O35627 | |||||
| NR1I3_MOUSE.H11MO.1.D |  |
MOUSE:Nr1i3 | 8 | D | 1 | RAGTTCAb | HOCOMOCOv9 | Integrative | 33 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 1346307 | 12355 | NR1I3_MOUSE | O35627 | |||||
| VDR_MOUSE.H11MO.0.A |  |
MOUSE:Vdr | 16 | A | 0 | vRGKKSAbhRRGKKYR | HOCOMOCOv11 | ChIP-Seq | 0.943 | 0.932 | 48 | 30 | 500 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 103076 | 22337 | VDR_MOUSE | P48281 | |
| VDR_MOUSE.H11MO.1.A |  |
MOUSE:Vdr | 9 | A | 1 | hRRGKTCAb | HOCOMOCOv11 | ChIP-Seq | 0.877 | 0.821 | 48 | 30 | 500 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 103076 | 22337 | VDR_MOUSE | P48281 | |
| VDR_MOUSE.H11DI.0.A |  |
MOUSE:Vdr | 18 | A | 0 | nvRGGKSAnnRRGKKCRn | HOCOMOCOv11 | ChIP-Seq | 0.953 | 0.939 | 48 | 30 | 499 | Thyroid hormone receptor-related factors (NR1){2.1.2} | Vitamin D receptor (NR1I){2.1.2.4} | 103076 | 22337 | VDR_MOUSE | P48281 |