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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
CRX_HUMAN.H11MO.0.B HUMAN:CRX 13 B 0 hvRdvGGATTAdv HOCOMOCOv11 ChIP-Seq 0.933 8 500 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 2383 1406 CRX_HUMAN O43186
OTX1_HUMAN.H11MO.0.D HUMAN:OTX1 8 D 0 nGGATTAn HOCOMOCOv9 Integrative 8 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 8521 5013 OTX1_HUMAN P32242
OTX2_HUMAN.H11MO.0.A HUMAN:OTX2 11 A 0 ddRGGATTAdv HOCOMOCOv11 ChIP-Seq 0.863 0.886 5 18 500 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 8522 5015 OTX2_HUMAN P32243
OTX2_HUMAN.H11DI.0.A HUMAN:OTX2 14 A 0 ndddRGGATTAdvn HOCOMOCOv11 ChIP-Seq 0.879 0.92 5 18 500 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 8522 5015 OTX2_HUMAN P32243
CRX_MOUSE.H11MO.0.A MOUSE:Crx 13 A 0 hvRdvGGATTAdv HOCOMOCOv11 ChIP-Seq 0.933 8 500 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 1194883 12951 CRX_MOUSE O54751
OTX1_MOUSE.H11MO.0.D MOUSE:Otx1 8 D 0 nGGATTAn HOCOMOCOv9 Integrative 8 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 97450 18423 OTX1_MOUSE P80205
OTX2_MOUSE.H11MO.0.A MOUSE:Otx2 12 A 0 dvddRGGATTAd HOCOMOCOv11 ChIP-Seq 0.847 0.904 5 18 500 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 97451 OTX2_MOUSE P80206
CRX_MOUSE.H11DI.0.A MOUSE:Crx 13 A 0 nvddvRGATTAdn HOCOMOCOv11 ChIP-Seq 0.946 8 501 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 1194883 12951 CRX_MOUSE O54751
OTX2_MOUSE.H11DI.0.A MOUSE:Otx2 14 A 0 ndddRGGATTAdvn HOCOMOCOv11 ChIP-Seq 0.879 0.92 5 18 500 Paired-related HD factors{3.1.3} OTX{3.1.3.17} 97451 OTX2_MOUSE P80206