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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
PAX3_HUMAN.H11MO.0.D HUMAN:PAX3 13 D 0 vhTAATCGATTAh HOCOMOCOv10 HT-SELEX 5195 Paired plus homeo domain{3.2.1} PAX-3/7{3.2.1.1} 8617 5077 PAX3_HUMAN P23760
PAX4_HUMAN.H11MO.0.D HUMAN:PAX4 12 D 0 hdhhTAATKMdh HOCOMOCOv10 HT-SELEX 934 Paired plus homeo domain{3.2.1} PAX-4/6{3.2.1.2} 8618 5078 PAX4_HUMAN O43316
PAX6_HUMAN.H11MO.0.C HUMAN:PAX6 12 C 0 WYMYRCWTSRnT HOCOMOCOv11 ChIP-Seq 0.749 0.734 6 8 500 Paired plus homeo domain{3.2.1} PAX-4/6{3.2.1.2} 8620 5080 PAX6_HUMAN P26367
PAX7_HUMAN.H11MO.0.D HUMAN:PAX7 11 D 0 TAATYGATTAd HOCOMOCOv10 HT-SELEX 17615 Paired plus homeo domain{3.2.1} PAX-3/7{3.2.1.1} 8621 5081 PAX7_HUMAN P23759
PAX6_HUMAN.H11DI.0.C HUMAN:PAX6 15 C 0 hKYMYGCWTSRvYKv HOCOMOCOv11 ChIP-Seq 0.68 0.791 6 8 504 Paired plus homeo domain{3.2.1} PAX-4/6{3.2.1.2} 8620 5080 PAX6_HUMAN P26367
PAX3_MOUSE.H11MO.0.D MOUSE:Pax3 13 D 0 ndnWMATKGvWKh HOCOMOCOv11 ChIP-Seq 0.773 3 455 Paired plus homeo domain{3.2.1} PAX-3/7{3.2.1.1} 97487 18505 PAX3_MOUSE P24610
PAX6_MOUSE.H11MO.0.C MOUSE:Pax6 12 C 0 WYMYRCWTSRnT HOCOMOCOv11 ChIP-Seq 0.749 0.734 6 8 500 Paired plus homeo domain{3.2.1} PAX-4/6{3.2.1.2} 97490 18508 PAX6_MOUSE P63015
PAX3_MOUSE.H11DI.0.C MOUSE:Pax3 16 C 0 nnbvdnWAATbdvddd HOCOMOCOv11 ChIP-Seq 0.817 3 447 Paired plus homeo domain{3.2.1} PAX-3/7{3.2.1.1} 97487 18505 PAX3_MOUSE P24610
PAX6_MOUSE.H11DI.0.B MOUSE:Pax6 15 B 0 hKYvYRChTSRnYRv HOCOMOCOv11 ChIP-Seq 0.606 0.8 6 8 500 Paired plus homeo domain{3.2.1} PAX-4/6{3.2.1.2} 97490 18508 PAX6_MOUSE P63015