Check the newest release v13
PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
SOX10_HUMAN.H11MO.0.B HUMAN:SOX10 16 B 0 vARdRvvnbYWTTGTb HOCOMOCOv11 ChIP-Seq 0.91 0.763 3 3 500 SOX-related factors{4.1.1} Group E{4.1.1.5} 11190 6663 SOX10_HUMAN P56693
SOX10_HUMAN.H11MO.1.A HUMAN:SOX10 13 A 1 bbbCTTTSTbYhh HOCOMOCOv11 ChIP-Seq 0.833 0.832 3 3 505 SOX-related factors{4.1.1} Group E{4.1.1.5} 11190 6663 SOX10_HUMAN P56693
SOX8_HUMAN.H11MO.0.D HUMAN:SOX8 16 D 0 WvACTGhAATTSWYbh HOCOMOCOv10 HT-SELEX 4026 SOX-related factors{4.1.1} Group E{4.1.1.5} 11203 30812 SOX8_HUMAN P57073
SOX9_HUMAN.H11MO.0.B HUMAN:SOX9 16 B 0 AAdRvnnbYWTTGTKY HOCOMOCOv11 ChIP-Seq 0.718 0.981 6 25 500 SOX-related factors{4.1.1} Group E{4.1.1.5} 11204 6662 SOX9_HUMAN P48436
SOX9_HUMAN.H11MO.1.B HUMAN:SOX9 9 B 1 YSWTTGKYY HOCOMOCOv11 ChIP-Seq 0.777 0.892 6 25 501 SOX-related factors{4.1.1} Group E{4.1.1.5} 11204 6662 SOX9_HUMAN P48436
SOX10_HUMAN.H11DI.0.B HUMAN:SOX10 19 B 0 dWhARdvvnbbCWTTGTbh HOCOMOCOv11 ChIP-Seq 0.936 0.762 3 3 503 SOX-related factors{4.1.1} Group E{4.1.1.5} 11190 6663 SOX10_HUMAN P56693
SOX9_HUMAN.H11DI.0.B HUMAN:SOX9 19 B 0 vMMAARRvnnbCWTTGTKh HOCOMOCOv11 ChIP-Seq 0.663 0.987 6 25 501 SOX-related factors{4.1.1} Group E{4.1.1.5} 11204 6662 SOX9_HUMAN P48436
SOX9_MOUSE.H11MO.0.A MOUSE:Sox9 16 A 0 AAdRvnnbYWTTGTKY HOCOMOCOv11 ChIP-Seq 0.718 0.981 6 25 500 SOX-related factors{4.1.1} Group E{4.1.1.5} 98371 20682 SOX9_MOUSE Q04887
SOX9_MOUSE.H11MO.1.A MOUSE:Sox9 11 A 1 bCWYTGTKYhb HOCOMOCOv11 ChIP-Seq 0.679 0.93 6 25 499 SOX-related factors{4.1.1} Group E{4.1.1.5} 98371 20682 SOX9_MOUSE Q04887
SOX9_MOUSE.H11DI.0.A MOUSE:Sox9 19 A 0 vMMAAdRvvnbCWTTGTKb HOCOMOCOv11 ChIP-Seq 0.655 0.989 6 25 500 SOX-related factors{4.1.1} Group E{4.1.1.5} 98371 20682 SOX9_MOUSE Q04887