Check the newest release v13
PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
AP2A_HUMAN.H11MO.0.A HUMAN:TFAP2A 15 A 0 dddSCCTGRGGShdd HOCOMOCOv10 ChIP-Seq 0.956 0.937 13 13 500 AP-2{1.3.1} AP-2alpha{1.3.1.0.1} 11742 7020 AP2A_HUMAN P05549
AP2B_HUMAN.H11MO.0.B HUMAN:TFAP2B 10 B 0 GSCYGRGGRv HOCOMOCOv9 Integrative 30 AP-2{1.3.1} AP-2beta{1.3.1.0.2} 11743 7021 AP2B_HUMAN Q92481
AP2C_HUMAN.H11MO.0.A HUMAN:TFAP2C 14 A 0 vddSCCTGRGGShv HOCOMOCOv10 ChIP-Seq 0.95 0.941 18 6 501 AP-2{1.3.1} AP-2gamma{1.3.1.0.3} 11744 7022 AP2C_HUMAN Q92754
AP2D_HUMAN.H11MO.0.D HUMAN:TFAP2D 14 D 0 nGbCCGRGGCnCGY HOCOMOCOv9 Integrative 5 AP-2{1.3.1} AP-2delta{1.3.1.0.4} 15581 83741 AP2D_HUMAN Q7Z6R9
AP2A_HUMAN.H11DI.0.A HUMAN:TFAP2A 15 A 0 nhdSCCYGRGGSndn HOCOMOCOv11 ChIP-Seq 0.961 0.956 13 13 500 AP-2{1.3.1} AP-2alpha{1.3.1.0.1} 11742 7020 AP2A_HUMAN P05549
AP2C_HUMAN.H11DI.0.A HUMAN:TFAP2C 17 A 0 nndSCCYGRGGShnndn HOCOMOCOv11 ChIP-Seq 0.964 0.959 18 6 497 AP-2{1.3.1} AP-2gamma{1.3.1.0.3} 11744 7022 AP2C_HUMAN Q92754
AP2A_MOUSE.H11MO.0.A MOUSE:Tfap2a 12 A 0 vbdSCCYGRGGC HOCOMOCOv11 ChIP-Seq 0.939 0.955 13 13 500 AP-2{1.3.1} AP-2alpha{1.3.1.0.1} 104671 21418 AP2A_MOUSE P34056
AP2B_MOUSE.H11MO.0.B MOUSE:Tfap2b 10 B 0 GSCYGRGGRv HOCOMOCOv9 Integrative 30 AP-2{1.3.1} AP-2beta{1.3.1.0.2} 104672 21419 AP2B_MOUSE Q61313
AP2C_MOUSE.H11MO.0.A MOUSE:Tfap2c 13 A 0 bdSCCYCRGGShn HOCOMOCOv11 ChIP-Seq 0.939 0.956 18 6 500 AP-2{1.3.1} AP-2gamma{1.3.1.0.3} 106032 21420 AP2C_MOUSE Q61312
AP2D_MOUSE.H11MO.0.D MOUSE:Tfap2d 14 D 0 nGbCCGRGGCnCGY HOCOMOCOv9 Integrative 5 AP-2{1.3.1} AP-2delta{1.3.1.0.4} 2153466 226896 AP2D_MOUSE Q91ZK0
AP2A_MOUSE.H11DI.0.A MOUSE:Tfap2a 16 A 0 nvbdSCCYGRGGCnvn HOCOMOCOv11 ChIP-Seq 0.954 0.964 13 13 501 AP-2{1.3.1} AP-2alpha{1.3.1.0.1} 104671 21418 AP2A_MOUSE P34056
AP2C_MOUSE.H11DI.0.A MOUSE:Tfap2c 17 A 0 nhnbnSCCYCAGGShnn HOCOMOCOv11 ChIP-Seq 0.954 0.962 18 6 493 AP-2{1.3.1} AP-2gamma{1.3.1.0.3} 106032 21420 AP2C_MOUSE Q61312