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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
NFIA_HUMAN.H11MO.0.C HUMAN:NFIA 15 C 0 hTGGShnGnhKCCWd HOCOMOCOv9 Integrative 233 Nuclear factor 1{7.1.2} NF-1A (NF-IA){7.1.2.0.1} 7784 4774 NFIA_HUMAN Q12857
NFIA_HUMAN.H11MO.1.D HUMAN:NFIA 7 D 1 hYTGGCd HOCOMOCOv9 Integrative 267 Nuclear factor 1{7.1.2} NF-1A (NF-IA){7.1.2.0.1} 7784 4774 NFIA_HUMAN Q12857
NFIB_HUMAN.H11MO.0.D HUMAN:NFIB 9 D 0 hYYTGGCWb HOCOMOCOv11 ChIP-Seq 0.612 0.829 2 2 500 Nuclear factor 1{7.1.2} NF-1B (NF-IB){7.1.2.0.2} 7785 4781 NFIB_HUMAN O00712
NFIC_HUMAN.H11MO.0.A HUMAN:NFIC 17 A 0 bYKGGMhbChdKCCMdv HOCOMOCOv11 ChIP-Seq 0.945 0.472 18 1 500 Nuclear factor 1{7.1.2} NF-1C (NF-IC){7.1.2.0.3} 7786 4782 NFIC_HUMAN P08651
NFIC_HUMAN.H11MO.1.A HUMAN:NFIC 9 A 1 bbTTGGCWb HOCOMOCOv11 ChIP-Seq 0.932 0.831 18 1 500 Nuclear factor 1{7.1.2} NF-1C (NF-IC){7.1.2.0.3} 7786 4782 NFIC_HUMAN P08651
NFIB_HUMAN.H11DI.0.D HUMAN:NFIB 13 D 0 nSYTGGCWbhndn HOCOMOCOv11 ChIP-Seq 0.624 0.845 2 2 501 Nuclear factor 1{7.1.2} NF-1B (NF-IB){7.1.2.0.2} 7785 4781 NFIB_HUMAN O00712
NFIC_HUMAN.H11DI.0.A HUMAN:NFIC 19 A 0 nbYTGGChbnvdKYChdvn HOCOMOCOv11 ChIP-Seq 0.97 0.701 18 1 500 Nuclear factor 1{7.1.2} NF-1C (NF-IC){7.1.2.0.3} 7786 4782 NFIC_HUMAN P08651
NFIA_MOUSE.H11MO.0.C MOUSE:Nfia 15 C 0 hTGGShnGnhKCCWd HOCOMOCOv9 Integrative 233 Nuclear factor 1{7.1.2} NF-1A (NF-IA){7.1.2.0.1} 108056 18027 NFIA_MOUSE Q02780
NFIA_MOUSE.H11MO.1.D MOUSE:Nfia 7 D 1 hYTGGCd HOCOMOCOv9 Integrative 267 Nuclear factor 1{7.1.2} NF-1A (NF-IA){7.1.2.0.1} 108056 18027 NFIA_MOUSE Q02780
NFIB_MOUSE.H11MO.0.C MOUSE:Nfib 9 C 0 YYTGGCWbv HOCOMOCOv11 ChIP-Seq 0.596 0.832 2 2 500 Nuclear factor 1{7.1.2} NF-1B{7.1.2.0.2} 103188 18028 NFIB_MOUSE P97863
NFIC_MOUSE.H11MO.0.A MOUSE:Nfic 9 A 0 bbTTGGCWb HOCOMOCOv11 ChIP-Seq 0.932 0.831 18 1 500 Nuclear factor 1{7.1.2} NF-1C{7.1.2.0.3} 109591 18029 NFIC_MOUSE P70255
NFIC_MOUSE.H11MO.1.A MOUSE:Nfic 15 A 1 bYTGGCWbnnnbhYh HOCOMOCOv11 ChIP-Seq 0.958 0.807 18 1 410 Nuclear factor 1{7.1.2} NF-1C{7.1.2.0.3} 109591 18029 NFIC_MOUSE P70255
NFIB_MOUSE.H11DI.0.C MOUSE:Nfib 13 C 0 nSYTGGCWbhndn HOCOMOCOv11 ChIP-Seq 0.624 0.845 2 2 501 Nuclear factor 1{7.1.2} NF-1B{7.1.2.0.2} 103188 18028 NFIB_MOUSE P97863
NFIC_MOUSE.H11DI.0.A MOUSE:Nfic 17 A 0 nbYTGGCWbnndbYYhd HOCOMOCOv11 ChIP-Seq 0.976 0.879 18 1 295 Nuclear factor 1{7.1.2} NF-1C{7.1.2.0.3} 109591 18029 NFIC_MOUSE P70255