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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
NFKB1_HUMAN.H11MO.1.B HUMAN:NFKB1 11 B 1 GGGAAAbYCCC HOCOMOCOv11 ChIP-Seq 0.726 0.953 7 16 503 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 7794 4790 NFKB1_HUMAN P19838
NFKB2_HUMAN.H11MO.0.B HUMAN:NFKB2 11 B 0 KGGRAAdYCCC HOCOMOCOv11 ChIP-Seq 0.977 4 500 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 7795 4791 NFKB2_HUMAN Q00653
RELB_HUMAN.H11MO.0.C HUMAN:RELB 12 C 0 vRGGGMTTTSMh HOCOMOCOv9 Integrative 28 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 9956 5971 RELB_HUMAN Q01201
REL_HUMAN.H11MO.0.B HUMAN:REL 15 B 0 dvhdGGGRAWKbMSW HOCOMOCOv11 ChIP-Seq 0.921 11 178 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 9954 5966 REL_HUMAN Q04864
TF65_HUMAN.H11MO.0.A HUMAN:RELA 14 A 0 hdGGGRhTTTCChv HOCOMOCOv11 ChIP-Seq 0.977 0.906 188 99 500 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 9955 5970 TF65_HUMAN Q04206
NFKB1_HUMAN.H11MO.0.A RETRACTED!!! HUMAN:NFKB1 8 A 0 RGGGAARd HOCOMOCOv11 ChIP-Seq 0.94 0.897 7 16 265 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 7794 4790 NFKB1_HUMAN P19838
NFKB1_HUMAN.H11DI.1.B HUMAN:NFKB1 14 B 1 ndGGGRAAbhCCCh HOCOMOCOv11 ChIP-Seq 0.787 0.965 7 16 528 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 7794 4790 NFKB1_HUMAN P19838
NFKB2_HUMAN.H11DI.0.B HUMAN:NFKB2 14 B 0 nKGGRAAdYCCCdn HOCOMOCOv11 ChIP-Seq 0.986 4 511 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 7795 4791 NFKB2_HUMAN Q00653
TF65_HUMAN.H11DI.0.A HUMAN:RELA 15 A 0 ndGGGRvTTTCChvn HOCOMOCOv11 ChIP-Seq 0.988 0.91 188 99 504 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 9955 5970 TF65_HUMAN Q04206
NFKB1_HUMAN.H11DI.0.A RETRACTED!!! HUMAN:NFKB1 14 A 0 nWGGGRAAbhSMSh HOCOMOCOv11 ChIP-Seq 0.867 0.958 7 16 319 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 7794 4790 NFKB1_HUMAN P19838
NFKB1_MOUSE.H11MO.0.A MOUSE:Nfkb1 11 A 0 GGGAAAbYCCC HOCOMOCOv11 ChIP-Seq 0.726 0.953 7 16 503 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 97312 18033 NFKB1_MOUSE P25799
NFKB2_MOUSE.H11MO.0.C MOUSE:Nfkb2 11 C 0 KGGRAAdYCCC HOCOMOCOv11 ChIP-Seq 0.977 4 500 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 1099800 18034 NFKB2_MOUSE Q9WTK5
RELB_MOUSE.H11MO.0.C MOUSE:Relb 12 C 0 vRGGGMTTTSMh HOCOMOCOv9 Integrative 28 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 103289 19698 RELB_MOUSE Q04863
REL_MOUSE.H11MO.0.A MOUSE:Rel 15 A 0 dvhdGGGRAWKbMSW HOCOMOCOv11 ChIP-Seq 0.921 11 178 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 97897 REL_MOUSE P15307
TF65_MOUSE.H11MO.0.A MOUSE:Rela 11 A 0 KGGRvTTTCCM HOCOMOCOv11 ChIP-Seq 0.974 0.931 188 99 500 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 103290 19697 TF65_MOUSE Q04207
NFKB1_MOUSE.H11DI.0.A MOUSE:Nfkb1 14 A 0 ndGGGRAAbhCCCh HOCOMOCOv11 ChIP-Seq 0.787 0.965 7 16 528 NF-kappaB-related factors{6.1.1} NF-kappaB p50 subunit-like factors{6.1.1.1} 97312 18033 NFKB1_MOUSE P25799
TF65_MOUSE.H11DI.0.A MOUSE:Rela 24 A 0 ndGGRMWKYCChvdvYbdbnhhMn HOCOMOCOv11 ChIP-Seq 0.951 0.953 188 99 498 NF-kappaB-related factors{6.1.1} NF-kappaB p65 subunit-like factors{6.1.1.2} 103290 19697 TF65_MOUSE Q04207