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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
RARA_HUMAN.H11MO.0.A HUMAN:RARA 20 A 0 vdddvdbbvdRAGKTCARRR HOCOMOCOv11 ChIP-Seq 0.951 0.927 29 32 499 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9864 5914 RARA_HUMAN P10276
RARA_HUMAN.H11MO.1.A HUMAN:RARA 10 A 1 vAGGKCAvvv HOCOMOCOv11 ChIP-Seq 0.948 0.874 29 32 501 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9864 5914 RARA_HUMAN P10276
RARA_HUMAN.H11MO.2.A HUMAN:RARA 17 A 2 RGKTSAnvvdvRSKKSR HOCOMOCOv9 Integrative 0.806 0.844 29 32 122 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9864 5914 RARA_HUMAN P10276
RARB_HUMAN.H11MO.0.D HUMAN:RARB 11 D 0 vAGGTCAnvRv HOCOMOCOv9 Integrative 25 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9865 5915 RARB_HUMAN P10826
RARG_HUMAN.H11MO.0.B HUMAN:RARG 18 B 0 RRGTCAvvvhSvMMbddv HOCOMOCOv11 ChIP-Seq 0.827 12 500 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9866 5916 RARG_HUMAN P13631
RARG_HUMAN.H11MO.1.B HUMAN:RARG 8 B 1 vAGGKCAn HOCOMOCOv11 ChIP-Seq 0.815 12 394 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9866 5916 RARG_HUMAN P13631
RARG_HUMAN.H11MO.2.D HUMAN:RARG 20 D 2 dddGbdbRvMnvRAGGTCAv HOCOMOCOv9 Integrative 0.656 12 24 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9866 5916 RARG_HUMAN P13631
RARA_HUMAN.H11DI.0.A HUMAN:RARA 23 A 0 vddRRbbvvRAGKTCARRRbYRn HOCOMOCOv11 ChIP-Seq 0.954 0.935 29 32 356 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9864 5914 RARA_HUMAN P10276
RARG_HUMAN.H11DI.0.A HUMAN:RARG 22 A 0 nvRKKYCAbnbbRhYCYnbnbn HOCOMOCOv11 ChIP-Seq 0.815 12 508 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 9866 5916 RARG_HUMAN P13631
RARA_MOUSE.H11MO.0.A MOUSE:Rara 20 A 0 RRdYYRdRAGKTCAAGGWSR HOCOMOCOv11 ChIP-Seq 0.753 0.906 29 32 447 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97856 19401 RARA_MOUSE P11416
RARA_MOUSE.H11MO.1.A MOUSE:Rara 20 A 1 vdddvdbbvdRAGKTCARRR HOCOMOCOv11 ChIP-Seq 0.951 0.927 29 32 499 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97856 19401 RARA_MOUSE P11416
RARA_MOUSE.H11MO.2.A MOUSE:Rara 17 A 2 RGKTSAnvvdvRSKKSR HOCOMOCOv9 Integrative 0.806 0.844 29 32 122 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97856 19401 RARA_MOUSE P11416
RARA_MOUSE.H11MO.3.A MOUSE:Rara 12 A 3 bhvAGGTCASvv HOCOMOCOv11 ChIP-Seq 0.912 0.888 29 32 499 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97856 19401 RARA_MOUSE P11416
RARB_MOUSE.H11MO.0.D MOUSE:Rarb 11 D 0 vAGGTCAnvRv HOCOMOCOv9 Integrative 25 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97857 218772 RARB_MOUSE P22605
RARG_MOUSE.H11MO.0.C MOUSE:Rarg 18 C 0 RRGTCAvvvhSvMMbddv HOCOMOCOv11 ChIP-Seq 0.827 12 500 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97858 19411 RARG_MOUSE P18911
RARG_MOUSE.H11MO.1.C MOUSE:Rarg 8 C 1 vAGGKCAn HOCOMOCOv11 ChIP-Seq 0.815 12 394 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97858 19411 RARG_MOUSE P18911
RARA_MOUSE.H11DI.0.A MOUSE:Rara 23 A 0 vddvdbbvdRAGKTCARRKbYRb HOCOMOCOv11 ChIP-Seq 0.863 0.945 29 32 498 Thyroid hormone receptor-related factors (NR1){2.1.2} Retinoic acid receptors (NR1B){2.1.2.1} 97856 19401 RARA_MOUSE P11416