Check the newest release v13
PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
FIGLA_HUMAN.H11MO.0.D HUMAN:FIGLA 11 D 0 dnhCAGGTGbd HOCOMOCOv10 HT-SELEX 159 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 24669 344018 FIGLA_HUMAN Q6QHK4
HAND1_HUMAN.H11MO.0.D HUMAN:HAND1 17 D 0 ddbYCTGShhWnYvTCW HOCOMOCOv11 ChIP-Seq 0.995 3 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 4807 9421 HAND1_HUMAN O96004
HAND1_HUMAN.H11MO.1.D HUMAN:HAND1 7 D 1 dSYCTGS HOCOMOCOv11 ChIP-Seq 0.951 3 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 4807 9421 HAND1_HUMAN O96004
PTF1A_HUMAN.H11MO.0.B HUMAN:PTF1A 18 B 0 vCAGCTGbbnbbbbYYhv HOCOMOCOv11 ChIP-Seq 0.963 20 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 23734 256297 PTF1A_HUMAN Q7RTS3
PTF1A_HUMAN.H11MO.1.B HUMAN:PTF1A 9 B 1 RRCAGMTGK HOCOMOCOv11 ChIP-Seq 0.93 20 503 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 23734 256297 PTF1A_HUMAN Q7RTS3
TWST1_HUMAN.H11MO.0.A HUMAN:TWIST1 17 A 0 vCAKMTGKWWbbvRTYW HOCOMOCOv11 ChIP-Seq 0.969 0.539 9 8 497 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 12428 7291 TWST1_HUMAN Q15672
TWST1_HUMAN.H11MO.1.A HUMAN:TWIST1 10 A 1 nvCATSTGKW HOCOMOCOv11 ChIP-Seq 0.971 0.567 9 8 502 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 12428 7291 TWST1_HUMAN Q15672
TWST1_HUMAN.H11DI.0.A HUMAN:TWIST1 20 A 0 nvCAKCTGKhhbbvAKhWdn HOCOMOCOv11 ChIP-Seq 0.997 0.568 9 8 225 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 12428 7291 TWST1_HUMAN Q15672
HAND1_MOUSE.H11MO.0.C MOUSE:Hand1 17 C 0 ddbYCTGShhWnYvTCW HOCOMOCOv11 ChIP-Seq 0.995 3 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 103577 15110 HAND1_MOUSE Q64279
HAND1_MOUSE.H11MO.1.C MOUSE:Hand1 7 C 1 dSYCTGS HOCOMOCOv11 ChIP-Seq 0.951 3 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 103577 15110 HAND1_MOUSE Q64279
PTF1A_MOUSE.H11MO.0.A MOUSE:Ptf1a 18 A 0 vCAGCTGbbnbbbbYYhv HOCOMOCOv11 ChIP-Seq 0.963 20 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 1328312 19213 PTF1A_MOUSE Q9QX98
PTF1A_MOUSE.H11MO.1.A MOUSE:Ptf1a 9 A 1 RRCAGMTGK HOCOMOCOv11 ChIP-Seq 0.93 20 503 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 1328312 19213 PTF1A_MOUSE Q9QX98
TWST1_MOUSE.H11MO.0.B MOUSE:Twist1 17 B 0 vCAKMTGKWhbbvATYW HOCOMOCOv11 ChIP-Seq 0.969 0.594 9 8 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 98872 22160 TWST1_MOUSE P26687
TWST1_MOUSE.H11MO.1.B MOUSE:Twist1 11 B 1 vvCAKCTGKhh HOCOMOCOv11 ChIP-Seq 0.978 0.604 9 8 470 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 98872 22160 TWST1_MOUSE P26687
HAND1_MOUSE.H11DI.0.C MOUSE:Hand1 19 C 0 nddvYCTGShhWnYvTCWn HOCOMOCOv11 ChIP-Seq 0.998 3 505 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 103577 15110 HAND1_MOUSE Q64279
PTF1A_MOUSE.H11DI.0.A MOUSE:Ptf1a 20 A 0 nMCAKCTGSbnbhbhbbhhn HOCOMOCOv11 ChIP-Seq 0.969 20 500 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 1328312 19213 PTF1A_MOUSE Q9QX98
TWST1_MOUSE.H11DI.0.B MOUSE:Twist1 19 B 0 nvCAKMTGKWWbbvATYWn HOCOMOCOv11 ChIP-Seq 0.971 0.657 9 8 415 Tal-related factors{1.2.3} Twist-like factors{1.2.3.2} 98872 22160 TWST1_MOUSE P26687