Check the newest release v13
PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
ERG_HUMAN.H11MO.0.A HUMAN:ERG 13 A 0 vvRSAGGAAGbvv HOCOMOCOv11 ChIP-Seq 0.984 0.877 79 16 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3446 2078 ERG_HUMAN P11308
ETS1_HUMAN.H11MO.0.A HUMAN:ETS1 13 A 0 vvRSMGGAAGYRR HOCOMOCOv11 ChIP-Seq 0.963 0.927 45 33 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3488 2113 ETS1_HUMAN P14921
ETS2_HUMAN.H11MO.0.B HUMAN:ETS2 13 B 0 ddvdRGAARvRdv HOCOMOCOv11 ChIP-Seq 0.836 12 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3489 2114 ETS2_HUMAN P15036
ETV2_HUMAN.H11MO.0.B HUMAN:ETV2 16 B 0 vvvRRCAGGAARYvSv HOCOMOCOv11 ChIP-Seq 0.981 6 230 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3491 2116 ETV2_HUMAN O00321
ETV3_HUMAN.H11MO.0.D HUMAN:ETV3 14 D 0 dnhdTdTGCACYTY HOCOMOCOv10 HT-SELEX 12 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3492 2117 ETV3_HUMAN P41162
FEV_HUMAN.H11MO.0.B HUMAN:FEV 10 B 0 vvvRGARRhS HOCOMOCOv11 ChIP-Seq 0.753 0.887 2 4 498 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 18562 54738 FEV_HUMAN Q99581
FLI1_HUMAN.H11MO.0.A HUMAN:FLI1 18 A 0 vvdRRMAGGAAGbvRvvv HOCOMOCOv11 ChIP-Seq 0.987 0.892 50 32 529 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3749 2313 FLI1_HUMAN Q01543
FLI1_HUMAN.H11MO.1.A HUMAN:FLI1 13 A 1 vdRSAGGAAGbvd HOCOMOCOv11 ChIP-Seq 0.986 0.953 50 32 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3749 2313 FLI1_HUMAN Q01543
GABPA_HUMAN.H11MO.0.A HUMAN:GABPA 14 A 0 vvnvSCGGAAGYvv HOCOMOCOv11 ChIP-Seq 0.988 0.949 92 8 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 4071 2551 GABPA_HUMAN Q06546
ERG_HUMAN.H11DI.0.A HUMAN:ERG 15 A 0 vdvRSAGGAAGbvRv HOCOMOCOv11 ChIP-Seq 0.986 0.901 79 16 501 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3446 2078 ERG_HUMAN P11308
ETS1_HUMAN.H11DI.0.A HUMAN:ETS1 15 A 0 vvvRSMGGAAGYRRn HOCOMOCOv11 ChIP-Seq 0.966 0.94 45 33 502 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3488 2113 ETS1_HUMAN P14921
FLI1_HUMAN.H11DI.0.A HUMAN:FLI1 16 A 0 vvRRRvAGGAAGbvvv HOCOMOCOv11 ChIP-Seq 0.995 0.954 50 32 525 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 3749 2313 FLI1_HUMAN Q01543
GABPA_HUMAN.H11DI.0.A HUMAN:GABPA 17 A 0 vvvnvSCGGAAGYRvvn HOCOMOCOv11 ChIP-Seq 0.991 0.946 92 8 501 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 4071 2551 GABPA_HUMAN Q06546
ERG_MOUSE.H11MO.0.A MOUSE:Erg 14 A 0 vvvSMGGAARhdvv HOCOMOCOv11 ChIP-Seq 0.963 0.976 79 16 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95415 13876 ERG_MOUSE P81270
ETS1_MOUSE.H11MO.0.A MOUSE:Ets1 14 A 0 vvvRSMGGAAGYSS HOCOMOCOv11 ChIP-Seq 0.953 0.964 45 33 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95455 23871 ETS1_MOUSE P27577
ETV2_MOUSE.H11MO.0.A MOUSE:Etv2 16 A 0 vvvRRCAGGAARYvSv HOCOMOCOv11 ChIP-Seq 0.981 6 230 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 99253 14008 ETV2_MOUSE P41163
FEV_MOUSE.H11MO.0.B MOUSE:Fev 10 B 0 vvvRGARRhS HOCOMOCOv11 ChIP-Seq 0.753 0.887 2 4 498 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 2449712 260298 FEV_MOUSE Q8QZW2
FLI1_MOUSE.H11MO.0.A MOUSE:Fli1 14 A 0 vvvdSMGGAAGbvv HOCOMOCOv11 ChIP-Seq 0.953 0.958 50 32 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95554 14247 FLI1_MOUSE P26323
FLI1_MOUSE.H11MO.1.A MOUSE:Fli1 19 A 1 vvvvvRSAGGAAGbvvvvv HOCOMOCOv11 ChIP-Seq 0.983 0.939 50 32 515 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95554 14247 FLI1_MOUSE P26323
GABPA_MOUSE.H11MO.0.A MOUSE:Gabpa 14 A 0 vvvvSCGGAAGYRv HOCOMOCOv11 ChIP-Seq 0.988 0.952 92 8 500 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95610 14390 GABPA_MOUSE Q00422
ERG_MOUSE.H11DI.0.A MOUSE:Erg 23 A 0 vvvvbvvvMMGGAARbSvvbbnn HOCOMOCOv10 ChIP-Seq 0.958 0.977 79 16 497 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95415 13876 ERG_MOUSE P81270
ETS1_MOUSE.H11DI.0.A MOUSE:Ets1 15 A 0 vvvRSMGGAAGYRvn HOCOMOCOv11 ChIP-Seq 0.959 0.966 45 33 511 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95455 23871 ETS1_MOUSE P27577
ETV2_MOUSE.H11DI.0.A MOUSE:Etv2 17 A 0 vvdvRCAGGAARYdSvn HOCOMOCOv11 ChIP-Seq 0.985 6 526 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 99253 14008 ETV2_MOUSE P41163
FLI1_MOUSE.H11DI.0.A MOUSE:Fli1 16 A 0 vvvSMGGAARbSvvbv HOCOMOCOv11 ChIP-Seq 0.958 0.969 50 32 499 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95554 14247 FLI1_MOUSE P26323
GABPA_MOUSE.H11DI.0.A MOUSE:Gabpa 15 A 0 vvvSMGGAAGYRvnv HOCOMOCOv11 ChIP-Seq 0.988 0.957 92 8 503 Ets-related factors{3.5.2} Ets-like factors{3.5.2.1} 95610 14390 GABPA_MOUSE Q00422