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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
ATOH1_HUMAN.H11MO.0.B HUMAN:ATOH1 9 B 0 RRCAGMTGK HOCOMOCOv11 ChIP-Seq 0.759 0.988 3 4 502 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 797 474 ATOH1_HUMAN Q92858
BHA15_HUMAN.H11MO.0.B HUMAN:BHLHA15 11 B 0 vvRRCAGCTGK HOCOMOCOv11 ChIP-Seq 0.988 6 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 22265 168620 BHA15_HUMAN Q7RTS1
BHE22_HUMAN.H11MO.0.D HUMAN:BHLHE22 13 D 0 dvCATATGTTYhh HOCOMOCOv10 HT-SELEX 2250 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 11963 27319 BHE22_HUMAN Q8NFJ8
BHE23_HUMAN.H11MO.0.D HUMAN:BHLHE23 12 D 0 dvnRKRTGKKdb HOCOMOCOv10 HT-SELEX 394 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 16093 128408 BHE23_HUMAN Q8NDY6
NDF1_HUMAN.H11MO.0.A HUMAN:NEUROD1 10 A 0 RRCAGMTGGb HOCOMOCOv11 ChIP-Seq 0.946 0.952 5 2 503 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 7762 4760 NDF1_HUMAN Q13562
NDF2_HUMAN.H11MO.0.B HUMAN:NEUROD2 9 B 0 RRCAGMTGG HOCOMOCOv11 ChIP-Seq 0.594 0.963 2 21 502 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 7763 4761 NDF2_HUMAN Q15784
NGN2_HUMAN.H11MO.0.D HUMAN:NEUROG2 12 D 0 vbRRCAGATGKb HOCOMOCOv11 ChIP-Seq 0.977 4 206 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 13805 63973 NGN2_HUMAN Q9H2A3
OLIG1_HUMAN.H11MO.0.D HUMAN:OLIG1 14 D 0 AMCATATGTTTWbb HOCOMOCOv10 HT-SELEX 495 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 16983 116448 OLIG1_HUMAN Q8TAK6
OLIG2_HUMAN.H11MO.0.B HUMAN:OLIG2 18 B 0 MCAKCTGYYbbbhdbhhb HOCOMOCOv11 ChIP-Seq 0.925 19 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 9398 10215 OLIG2_HUMAN Q13516
OLIG2_HUMAN.H11MO.1.B HUMAN:OLIG2 10 B 1 hMWKMTGYYb HOCOMOCOv11 ChIP-Seq 0.905 19 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 9398 10215 OLIG2_HUMAN Q13516
OLIG3_HUMAN.H11MO.0.D HUMAN:OLIG3 11 D 0 RMCATATGKTn HOCOMOCOv10 HT-SELEX 3197 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 18003 167826 OLIG3_HUMAN Q7RTU3
ATOH1_HUMAN.H11DI.0.B HUMAN:ATOH1 13 B 0 ndnRRCAGMTGSn HOCOMOCOv11 ChIP-Seq 0.788 0.996 3 4 501 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 797 474 ATOH1_HUMAN Q92858
NDF1_HUMAN.H11DI.0.A HUMAN:NEUROD1 14 A 0 nvnRRCAGATGGbn HOCOMOCOv11 ChIP-Seq 0.949 0.96 5 2 507 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 7762 4760 NDF1_HUMAN Q13562
NDF2_HUMAN.H11DI.0.B HUMAN:NEUROD2 15 B 0 dvvvnRRCAGATGGn HOCOMOCOv11 ChIP-Seq 0.619 0.97 2 21 560 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 7763 4761 NDF2_HUMAN Q15784
ATOH1_MOUSE.H11MO.0.B MOUSE:Atoh1 9 B 0 RRCAGMTGK HOCOMOCOv11 ChIP-Seq 0.759 0.988 3 4 502 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 104654 11921 ATOH1_MOUSE P48985
BHA15_MOUSE.H11MO.0.A MOUSE:Bhlha15 11 A 0 vvRRCAGCTGK HOCOMOCOv11 ChIP-Seq 0.988 6 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 891976 17341 BHA15_MOUSE Q9QYC3
NDF1_MOUSE.H11MO.0.A MOUSE:Neurod1 10 A 0 RRCAGMTGGb HOCOMOCOv11 ChIP-Seq 0.946 0.952 5 2 503 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 1339708 18012 NDF1_MOUSE Q60867
NDF2_MOUSE.H11MO.0.A MOUSE:Neurod2 10 A 0 RRCAGATGGb HOCOMOCOv11 ChIP-Seq 0.543 0.961 2 21 503 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 107755 18013 NDF2_MOUSE Q62414
NGN2_MOUSE.H11MO.0.C MOUSE:Neurog2 12 C 0 vbRRCAGATGKb HOCOMOCOv11 ChIP-Seq 0.977 4 206 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 109619 11924 NGN2_MOUSE P70447
OLIG2_MOUSE.H11MO.0.A MOUSE:Olig2 18 A 0 MCAKCTGYYbbbhdbhhb HOCOMOCOv11 ChIP-Seq 0.925 19 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 1355331 50913 OLIG2_MOUSE Q9EQW6
OLIG2_MOUSE.H11MO.1.A MOUSE:Olig2 10 A 1 hMWKMTGYYb HOCOMOCOv11 ChIP-Seq 0.905 19 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 1355331 50913 OLIG2_MOUSE Q9EQW6
ATOH1_MOUSE.H11DI.0.B MOUSE:Atoh1 13 B 0 ndnRRCAGMTGSn HOCOMOCOv11 ChIP-Seq 0.788 0.996 3 4 501 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 104654 11921 ATOH1_MOUSE P48985
BHA15_MOUSE.H11DI.0.A MOUSE:Bhlha15 13 A 0 nvvRRCAGCTGKn HOCOMOCOv11 ChIP-Seq 0.991 6 522 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 891976 17341 BHA15_MOUSE Q9QYC3
NDF1_MOUSE.H11DI.0.A MOUSE:Neurod1 14 A 0 nvnRRCAGATGGbn HOCOMOCOv11 ChIP-Seq 0.949 0.96 5 2 507 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 1339708 18012 NDF1_MOUSE Q60867
NDF2_MOUSE.H11DI.0.A MOUSE:Neurod2 15 A 0 dvvvnRRCAGATGGn HOCOMOCOv11 ChIP-Seq 0.619 0.97 2 21 560 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 107755 18013 NDF2_MOUSE Q62414
NGN2_MOUSE.H11DI.0.C MOUSE:Neurog2 13 C 0 vvnRRCAGATGGb HOCOMOCOv11 ChIP-Seq 0.984 4 513 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 109619 11924 NGN2_MOUSE P70447
OLIG2_MOUSE.H11DI.0.A MOUSE:Olig2 22 A 0 nMCAKMTGYYbhbndbhhbnhn HOCOMOCOv11 ChIP-Seq 0.941 19 500 Tal-related factors{1.2.3} Neurogenin / Atonal-like factors{1.2.3.4} 1355331 50913 OLIG2_MOUSE Q9EQW6