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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
IRF1_HUMAN.H11MO.0.A HUMAN:IRF1 20 A 0 vRRWndGAAASWGAAAShvv HOCOMOCOv11 ChIP-Seq 0.997 0.998 23 18 499 Interferon-regulatory factors{3.5.3} IRF-1{3.5.3.0.1} 6116 3659 IRF1_HUMAN P10914
IRF2_HUMAN.H11MO.0.A HUMAN:IRF2 20 A 0 nRRWvhGAAASYGAAASYvv HOCOMOCOv11 ChIP-Seq 0.994 8 499 Interferon-regulatory factors{3.5.3} IRF-2{3.5.3.0.2} 6117 3660 IRF2_HUMAN P14316
IRF3_HUMAN.H11MO.0.B HUMAN:IRF3 20 B 0 dRRRddRAAAvdGRAASnRR HOCOMOCOv11 ChIP-Seq 0.789 0.948 6 21 505 Interferon-regulatory factors{3.5.3} IRF-3{3.5.3.0.3} 6118 3661 IRF3_HUMAN Q14653
IRF4_HUMAN.H11MO.0.A HUMAN:IRF4 18 A 0 vdWdRvGGAASTGARAvh HOCOMOCOv11 ChIP-Seq 0.951 0.977 19 61 500 Interferon-regulatory factors{3.5.3} IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4} 6119 3662 IRF4_HUMAN Q15306
IRF5_HUMAN.H11MO.0.D HUMAN:IRF5 20 D 0 KAAAGGAAAGCnAAAAGTGM HOCOMOCOv9 Integrative 5 Interferon-regulatory factors{3.5.3} IRF-5{3.5.3.0.5} 6120 3663 IRF5_HUMAN Q13568
IRF7_HUMAN.H11MO.0.C HUMAN:IRF7 10 C 0 RAAAbYRAAW HOCOMOCOv9 Integrative 40 Interferon-regulatory factors{3.5.3} IRF-7{3.5.3.0.7} 6122 3665 IRF7_HUMAN Q92985
IRF8_HUMAN.H11MO.0.B HUMAN:IRF8 20 B 0 vdddvRGGAASTGAAASYdv HOCOMOCOv11 ChIP-Seq 0.996 59 505 Interferon-regulatory factors{3.5.3} IRF-8 (ICSBP1){3.5.3.0.8} 5358 3394 IRF8_HUMAN Q02556
IRF9_HUMAN.H11MO.0.C HUMAN:IRF9 12 C 0 GAAAbhGAAACT HOCOMOCOv9 Integrative 5 Interferon-regulatory factors{3.5.3} IRF-9 (ISGF-3gamma){3.5.3.0.9} 6131 10379 IRF9_HUMAN Q00978
IRF1_HUMAN.H11DI.0.A HUMAN:IRF1 23 A 0 nnRAAnhGAAASYGAAAShvdvn HOCOMOCOv11 ChIP-Seq 0.997 0.998 23 18 453 Interferon-regulatory factors{3.5.3} IRF-1{3.5.3.0.1} 6116 3659 IRF1_HUMAN P10914
IRF2_HUMAN.H11DI.0.A HUMAN:IRF2 21 A 0 ndRRvnRAAASYGAAASYvvn HOCOMOCOv11 ChIP-Seq 0.988 8 513 Interferon-regulatory factors{3.5.3} IRF-2{3.5.3.0.2} 6117 3660 IRF2_HUMAN P14316
IRF3_HUMAN.H11DI.0.B HUMAN:IRF3 23 B 0 nvdRRMdRGAAAvnGAAAvndvv HOCOMOCOv11 ChIP-Seq 0.797 0.962 6 21 510 Interferon-regulatory factors{3.5.3} IRF-3{3.5.3.0.3} 6118 3661 IRF3_HUMAN Q14653
IRF4_HUMAN.H11DI.0.A HUMAN:IRF4 19 A 0 ndddRvRGAASTGARWvhn HOCOMOCOv11 ChIP-Seq 0.958 0.982 19 61 502 Interferon-regulatory factors{3.5.3} IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4} 6119 3662 IRF4_HUMAN Q15306
IRF1_MOUSE.H11MO.0.A MOUSE:Irf1 20 A 0 vRMWnhGAAASYGAAASYvd HOCOMOCOv11 ChIP-Seq 0.997 0.999 23 18 504 Interferon-regulatory factors{3.5.3} IRF-1{3.5.3.0.1} 96590 16362 IRF1_MOUSE P15314
IRF2_MOUSE.H11MO.0.B MOUSE:Irf2 20 B 0 nRRWvhGAAASYGAAASYvv HOCOMOCOv11 ChIP-Seq 0.994 8 499 Interferon-regulatory factors{3.5.3} IRF-2{3.5.3.0.2} 96591 16363 IRF2_MOUSE P23906
IRF3_MOUSE.H11MO.0.A MOUSE:Irf3 20 A 0 dRRRddRAAAvdGRAASnRR HOCOMOCOv11 ChIP-Seq 0.789 0.948 6 21 505 Interferon-regulatory factors{3.5.3} IRF-3{3.5.3.0.3} 1859179 54131 IRF3_MOUSE P70671
IRF4_MOUSE.H11MO.0.A MOUSE:Irf4 18 A 0 ddRWvvRGAAvTGARAvh HOCOMOCOv11 ChIP-Seq 0.951 0.981 19 61 500 Interferon-regulatory factors{3.5.3} IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4} 1096873 16364 IRF4_MOUSE Q64287
IRF5_MOUSE.H11MO.0.D MOUSE:Irf5 20 D 0 KAAAGGAAAGCnAAAAGTGM HOCOMOCOv9 Integrative 5 Interferon-regulatory factors{3.5.3} IRF-5{3.5.3.0.5} 1350924 27056 IRF5_MOUSE P56477
IRF7_MOUSE.H11MO.0.C MOUSE:Irf7 10 C 0 RAAAbYRAAW HOCOMOCOv9 Integrative 40 Interferon-regulatory factors{3.5.3} IRF-7{3.5.3.0.7} 1859212 54123 IRF7_MOUSE P70434
IRF8_MOUSE.H11MO.0.A MOUSE:Irf8 20 A 0 vdddvRGGAASTGAAASYdv HOCOMOCOv11 ChIP-Seq 0.996 59 505 Interferon-regulatory factors{3.5.3} IRF-8 (ICSBP1){3.5.3.0.8} 96395 15900 IRF8_MOUSE P23611
IRF9_MOUSE.H11MO.0.C MOUSE:Irf9 12 C 0 GAAAbhGAAACT HOCOMOCOv9 Integrative 5 Interferon-regulatory factors{3.5.3} IRF-9 (ISGF-3gamma){3.5.3.0.9} 107587 16391 IRF9_MOUSE Q61179
IRF1_MOUSE.H11DI.0.A MOUSE:Irf1 23 A 0 nnRAAnhGAAASYGAAAShvdvn HOCOMOCOv11 ChIP-Seq 0.997 0.998 23 18 453 Interferon-regulatory factors{3.5.3} IRF-1{3.5.3.0.1} 96590 16362 IRF1_MOUSE P15314
IRF3_MOUSE.H11DI.0.A MOUSE:Irf3 23 A 0 nvdRRMdRGAAAvnGAAAvndvv HOCOMOCOv11 ChIP-Seq 0.797 0.962 6 21 510 Interferon-regulatory factors{3.5.3} IRF-3{3.5.3.0.3} 1859179 54131 IRF3_MOUSE P70671
IRF4_MOUSE.H11DI.0.A MOUSE:Irf4 20 A 0 nddWWvvRGAASTGARAvhn HOCOMOCOv11 ChIP-Seq 0.948 0.981 19 61 502 Interferon-regulatory factors{3.5.3} IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4} 1096873 16364 IRF4_MOUSE Q64287
IRF8_MOUSE.H11DI.0.A MOUSE:Irf8 22 A 0 ddWWvdGGAASTGAAASYvvvd HOCOMOCOv11 ChIP-Seq 0.997 59 513 Interferon-regulatory factors{3.5.3} IRF-8 (ICSBP1){3.5.3.0.8} 96395 15900 IRF8_MOUSE P23611