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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
RFX1_HUMAN.H11MO.0.B HUMAN:RFX1 22 B 0 bbbbSbGTTGCCWdGGvvMSvv HOCOMOCOv10 ChIP-Seq 0.712 0.995 3 7 457 RFX-related factors{3.3.3} RFX1 (EF-C){3.3.3.0.1} 9982 5989 RFX1_HUMAN P22670
RFX1_HUMAN.H11MO.1.B HUMAN:RFX1 11 B 1 bGTTGCCWdGR HOCOMOCOv11 ChIP-Seq 0.574 0.994 3 7 500 RFX-related factors{3.3.3} RFX1 (EF-C){3.3.3.0.1} 9982 5989 RFX1_HUMAN P22670
RFX2_HUMAN.H11MO.0.A HUMAN:RFX2 18 A 0 YbGTTGCCWWGGvRACvv HOCOMOCOv11 ChIP-Seq 0.976 0.991 7 7 426 RFX-related factors{3.3.3} RFX2{3.3.3.0.2} 9983 5990 RFX2_HUMAN P48378
RFX2_HUMAN.H11MO.1.A HUMAN:RFX2 12 A 1 YbGTTGCCWKGG HOCOMOCOv11 ChIP-Seq 0.965 0.996 7 7 501 RFX-related factors{3.3.3} RFX2{3.3.3.0.2} 9983 5990 RFX2_HUMAN P48378
RFX3_HUMAN.H11MO.0.B HUMAN:RFX3 14 B 0 bGTTRCCATGGhRn HOCOMOCOv9 Integrative 772 RFX-related factors{3.3.3} RFX3{3.3.3.0.3} 9984 5991 RFX3_HUMAN P48380
RFX4_HUMAN.H11MO.0.D HUMAN:RFX4 15 D 0 bGTTGCCATGGhWAY HOCOMOCOv10 HT-SELEX 2791 RFX-related factors{3.3.3} RFX4{3.3.3.0.4} 9985 5992 RFX4_HUMAN Q33E94
RFX5_HUMAN.H11MO.0.A HUMAN:RFX5 20 A 0 vbbvbbdGTYRCYRKGbvvv HOCOMOCOv11 ChIP-Seq 0.973 14 500 RFX-related factors{3.3.3} RFX5{3.3.3.0.5} 9986 5993 RFX5_HUMAN P48382
RFX5_HUMAN.H11MO.1.A HUMAN:RFX5 11 A 1 YWGTTdCYRKG HOCOMOCOv11 ChIP-Seq 0.926 14 167 RFX-related factors{3.3.3} RFX5{3.3.3.0.5} 9986 5993 RFX5_HUMAN P48382
RFX1_HUMAN.H11DI.0.B HUMAN:RFX1 23 B 0 bbbbSbGTTGCCWdGGvvMSvvb HOCOMOCOv10 ChIP-Seq 0.699 0.994 3 7 440 RFX-related factors{3.3.3} RFX1 (EF-C){3.3.3.0.1} 9982 5989 RFX1_HUMAN P22670
RFX2_HUMAN.H11DI.0.A HUMAN:RFX2 20 A 0 bbbGTTGCCAKGGhRACvvv HOCOMOCOv11 ChIP-Seq 0.981 0.993 7 7 355 RFX-related factors{3.3.3} RFX2{3.3.3.0.2} 9983 5990 RFX2_HUMAN P48378
RFX5_HUMAN.H11DI.0.A HUMAN:RFX5 23 A 0 nvnvbSvbYdGTYRCYRRGbvvv HOCOMOCOv10 ChIP-Seq 0.987 14 500 RFX-related factors{3.3.3} RFX5{3.3.3.0.5} 9986 5993 RFX5_HUMAN P48382
RFX1_MOUSE.H11MO.0.A MOUSE:Rfx1 22 A 0 bbbbSbGTTGCCWdGGvvMSvv HOCOMOCOv10 ChIP-Seq 0.712 0.995 3 7 457 RFX-related factors{3.3.3} RFX1 (EF-C){3.3.3.0.1} 105982 19724 RFX1_MOUSE P48377
RFX1_MOUSE.H11MO.1.A MOUSE:Rfx1 11 A 1 bGTTGCCWdGR HOCOMOCOv11 ChIP-Seq 0.574 0.994 3 7 500 RFX-related factors{3.3.3} RFX1 (EF-C){3.3.3.0.1} 105982 19724 RFX1_MOUSE P48377
RFX2_MOUSE.H11MO.0.A MOUSE:Rfx2 22 A 0 vbSnGTYRYYdKGGvRMYvdvn HOCOMOCOv11 ChIP-Seq 0.937 0.997 7 7 132 RFX-related factors{3.3.3} RFX2{3.3.3.0.2} 106583 19725 RFX2_MOUSE P48379
RFX2_MOUSE.H11MO.1.A MOUSE:Rfx2 11 A 1 bGTTGCCWdGG HOCOMOCOv11 ChIP-Seq 0.96 0.997 7 7 500 RFX-related factors{3.3.3} RFX2{3.3.3.0.2} 106583 19725 RFX2_MOUSE P48379
RFX3_MOUSE.H11MO.0.C MOUSE:Rfx3 16 C 0 SbGTTGCCWKGGvRAC HOCOMOCOv11 ChIP-Seq 0.989 2 351 RFX-related factors{3.3.3} RFX3{3.3.3.0.3} 106582 19726 RFX3_MOUSE P48381
RFX3_MOUSE.H11MO.1.C MOUSE:Rfx3 10 C 1 bGTTGCCWKG HOCOMOCOv11 ChIP-Seq 0.997 2 500 RFX-related factors{3.3.3} RFX3{3.3.3.0.3} 106582 19726 RFX3_MOUSE P48381
RFX6_MOUSE.H11MO.0.C MOUSE:Rfx6 11 C 0 bdGYWKCYnKG HOCOMOCOv11 ChIP-Seq 0.998 3 501 RFX-related factors{3.3.3} RFX6 (RFXDC-1){3.3.3.0.6} 2445208 320995 RFX6_MOUSE Q8C7R7
RFX6_MOUSE.H11MO.1.C MOUSE:Rfx6 14 C 1 dGYTGCYdKGvdvv HOCOMOCOv11 ChIP-Seq 0.979 3 502 RFX-related factors{3.3.3} RFX6 (RFXDC-1){3.3.3.0.6} 2445208 320995 RFX6_MOUSE Q8C7R7
RFX1_MOUSE.H11DI.0.A MOUSE:Rfx1 23 A 0 bbbbSbGTTGCCWdGGvvMSvvb HOCOMOCOv10 ChIP-Seq 0.699 0.994 3 7 440 RFX-related factors{3.3.3} RFX1 (EF-C){3.3.3.0.1} 105982 19724 RFX1_MOUSE P48377
RFX2_MOUSE.H11DI.0.A MOUSE:Rfx2 20 A 0 bbbGTTGCCWKGGhRACvvv HOCOMOCOv11 ChIP-Seq 0.978 0.998 7 7 360 RFX-related factors{3.3.3} RFX2{3.3.3.0.2} 106583 19725 RFX2_MOUSE P48379
RFX3_MOUSE.H11DI.0.C MOUSE:Rfx3 18 C 0 bSbGTTGCCWWGGnRACv HOCOMOCOv11 ChIP-Seq 0.994 2 354 RFX-related factors{3.3.3} RFX3{3.3.3.0.3} 106582 19726 RFX3_MOUSE P48381
RFX6_MOUSE.H11DI.0.C MOUSE:Rfx6 16 C 0 bbGYWKCYvdGnnvvn HOCOMOCOv11 ChIP-Seq 0.954 3 522 RFX-related factors{3.3.3} RFX6 (RFXDC-1){3.3.3.0.6} 2445208 320995 RFX6_MOUSE Q8C7R7