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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
E4F1_HUMAN.H11MO.0.D HUMAN:E4F1 9 D 0 nGTGACGTM HOCOMOCOv9 Integrative 9 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 3121 1877 E4F1_HUMAN Q66K89
PRDM4_HUMAN.H11MO.0.D HUMAN:PRDM4 16 D 0 bbGGGGRGMCTTGAAA HOCOMOCOv10 HT-SELEX 130 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 9348 11108 PRDM4_HUMAN Q9UKN5
REST_HUMAN.H11MO.0.A HUMAN:REST 22 A 0 dTCAGSACCdhGGACAGMdShh HOCOMOCOv11 ChIP-Seq 0.991 0.98 147 33 500 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 9966 5978 REST_HUMAN Q13127
RREB1_HUMAN.H11MO.0.D HUMAN:RREB1 22 D 0 dbSKbdGKKGKTGbTKKGKGGd HOCOMOCOv9 Integrative 26 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 10449 6239 RREB1_HUMAN Q92766
ZBT17_HUMAN.H11MO.0.A HUMAN:ZBTB17 19 A 0 vndRvhGRRGGMdGRRvdd HOCOMOCOv11 ChIP-Seq 0.959 0.911 21 25 513 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 12936 7709 ZBT17_HUMAN Q13105
ZBTB4_HUMAN.H11MO.0.D HUMAN:ZBTB4 17 D 0 nCWAGATGGCWGGTGGG HOCOMOCOv9 Integrative 19 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 23847 57659 ZBTB4_HUMAN Q9P1Z0
ZBTB4_HUMAN.H11MO.1.D HUMAN:ZBTB4 15 D 1 CRAKAGCGRTdGYGn HOCOMOCOv9 Integrative 32 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 23847 57659 ZBTB4_HUMAN Q9P1Z0
ZN335_HUMAN.H11MO.0.A HUMAN:ZNF335 22 A 0 RKSTGYCYnnnbhdvTGCCTSh HOCOMOCOv11 ChIP-Seq 0.96 0.968 2 4 103 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 15807 63925 ZN335_HUMAN Q9H4Z2
ZN335_HUMAN.H11MO.1.A HUMAN:ZNF335 7 A 1 YGCCTGW HOCOMOCOv11 ChIP-Seq 0.892 0.995 2 4 123 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 15807 63925 ZN335_HUMAN Q9H4Z2
ZN341_HUMAN.H11MO.0.C HUMAN:ZNF341 22 C 0 dvvRvRvdRvRRddGGAASRGM HOCOMOCOv11 ChIP-Seq 0.845 2 499 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 15992 84905 ZN341_HUMAN Q9BYN7
ZN341_HUMAN.H11MO.1.C HUMAN:ZNF341 9 C 1 GGAASAGCh HOCOMOCOv11 ChIP-Seq 0.813 2 500 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 15992 84905 ZN341_HUMAN Q9BYN7
ZN467_HUMAN.H11MO.0.C HUMAN:ZNF467 22 C 0 RGGGAGGRRvvRRRRRRRRRRv HOCOMOCOv11 ChIP-Seq 0.971 3 499 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 23154 168544 ZN467_HUMAN Q7Z7K2
ZN770_HUMAN.H11MO.0.C HUMAN:ZNF770 22 C 0 dGGAGGCYRRRRbdRRRGRvbb HOCOMOCOv11 ChIP-Seq 0.969 3 491 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 26061 54989 ZN770_HUMAN Q6IQ21
ZN770_HUMAN.H11MO.1.C HUMAN:ZNF770 11 C 1 dGGAGGCYGvR HOCOMOCOv11 ChIP-Seq 0.962 3 491 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 26061 54989 ZN770_HUMAN Q6IQ21
ZN784_HUMAN.H11MO.0.D HUMAN:ZNF784 11 D 0 dvGGTAGGTvn HOCOMOCOv10 HT-SELEX 256 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 33111 147808 ZN784_HUMAN Q8NCA9
ZNF8_HUMAN.H11MO.0.C HUMAN:ZNF8 22 C 0 TGTGGTAYATCCATWYARTGGA HOCOMOCOv11 ChIP-Seq 0.982 3 417 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 13154 7554 ZNF8_HUMAN P17098
REST_HUMAN.H11DI.0.A HUMAN:REST 24 A 0 nbYCAGSACCdhGGACAGYdSYhn HOCOMOCOv11 ChIP-Seq 0.999 0.996 147 33 319 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 9966 5978 REST_HUMAN Q13127
ZBT17_HUMAN.H11DI.0.A HUMAN:ZBTB17 23 A 0 ndvnvdddvhGRRGGMdGRRMdv HOCOMOCOv11 ChIP-Seq 0.961 0.912 21 25 500 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 12936 7709 ZBT17_HUMAN Q13105
ZN335_HUMAN.H11DI.0.A HUMAN:ZNF335 25 A 0 bRSbYKbYYnnvvhdvYGCCTGWhn HOCOMOCOv11 ChIP-Seq 0.928 0.976 2 4 118 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 15807 63925 ZN335_HUMAN Q9H4Z2
ZN467_HUMAN.H11DI.0.C HUMAN:ZNF467 25 C 0 vRGGGAGGRRvvRRRRRRRRRvRvv HOCOMOCOv11 ChIP-Seq 0.968 3 503 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 23154 168544 ZN467_HUMAN Q7Z7K2
ZN770_HUMAN.H11DI.0.C HUMAN:ZNF770 25 C 0 dGGAGGCYGRRRbvRSRRvvbbvbb HOCOMOCOv11 ChIP-Seq 0.981 3 476 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 26061 54989 ZN770_HUMAN Q6IQ21
ZNF8_HUMAN.H11DI.0.C HUMAN:ZNF8 25 C 0 TGTGGTAYATCCATWCAATGGAATA HOCOMOCOv11 ChIP-Seq 0.989 3 400 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 13154 7554 ZNF8_HUMAN P17098
E4F1_MOUSE.H11MO.0.D MOUSE:E4f1 9 D 0 nGTGACGTM HOCOMOCOv9 Integrative 9 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 109530 13560 E4F1_MOUSE Q8CCE9
PRDM9_MOUSE.H11MO.0.C MOUSE:Prdm9 19 C 0 hRnddGGYAGYAvCWbCWb HOCOMOCOv11 ChIP-Seq 0.919 4 490 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 2384854 PRDM9_MOUSE Q96EQ9
REST_MOUSE.H11MO.0.A MOUSE:Rest 22 A 0 dYCAGSACCdhGGACAGMdSMh HOCOMOCOv11 ChIP-Seq 0.99 0.982 147 33 378 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 104897 19712 REST_MOUSE Q8VIG1
RREB1_MOUSE.H11MO.0.D MOUSE:Rreb1 22 D 0 dbSKbdGKKGKTGbTKKGKGGd HOCOMOCOv9 Integrative 26 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 2443664 68750 RREB1_MOUSE Q3UH06
ZBT17_MOUSE.H11MO.0.A MOUSE:Zbtb17 19 A 0 vvvvSnGGRGGMGGGGvvv HOCOMOCOv11 ChIP-Seq 0.797 0.947 21 25 500 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 107410 22642 ZBT17_MOUSE Q60821
ZFP57_MOUSE.H11MO.0.B MOUSE:Zfp57 10 B 0 bYGCGGCAvv HOCOMOCOv11 ChIP-Seq 0.928 10 226 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 99204 22715 ZFP57_MOUSE Q8C6P8
ZN335_MOUSE.H11MO.0.A MOUSE:Znf335 22 A 0 RKSTGYCYnnnbhdvTGCCTSh HOCOMOCOv11 ChIP-Seq 0.96 0.968 2 4 103 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 2682313 329559 ZN335_MOUSE A2A5K6
ZN335_MOUSE.H11MO.1.A MOUSE:Znf335 7 A 1 YGCCTGW HOCOMOCOv11 ChIP-Seq 0.892 0.995 2 4 123 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 2682313 329559 ZN335_MOUSE A2A5K6
PRDM9_MOUSE.H11DI.0.C MOUSE:Prdm9 21 C 0 nhdnddRRYAGYAvCWbChbv HOCOMOCOv11 ChIP-Seq 0.91 4 245 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 2384854 PRDM9_MOUSE Q96EQ9
REST_MOUSE.H11DI.0.A MOUSE:Rest 24 A 0 nYCAGSACCdhGGACAGMdSYhnv HOCOMOCOv11 ChIP-Seq 0.999 0.998 147 33 332 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 104897 19712 REST_MOUSE Q8VIG1
ZBT17_MOUSE.H11DI.0.A MOUSE:Zbtb17 20 A 0 vvvSSnGGRGGMGGGGvvvv HOCOMOCOv11 ChIP-Seq 0.947 0.942 21 25 498 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 107410 22642 ZBT17_MOUSE Q60821
ZN335_MOUSE.H11DI.0.A MOUSE:Znf335 25 A 0 ndRGvYKbCYnvnRvdvYGCCTGWn HOCOMOCOv11 ChIP-Seq 0.894 0.987 2 4 114 Factors with multiple dispersed zinc fingers{2.3.4} unclassified{2.3.4.0} 2682313 329559 ZN335_MOUSE A2A5K6