PWMs for transcription factors
| Model | LOGO | Transcription factor | Model length | Quality | Model rank | Consensus | Model release | Data source | Best auROC (human) | Best auROC (mouse) | Peak sets in benchmark (human) | Peak sets in benchmark (mouse) | Aligned words | TF family | TF subfamily | HGNC | MGI | EntrezGene | UniProt ID | UniProt AC |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HXA10_HUMAN.H11MO.0.C |  |
HUMAN:HOXA10 | 12 | C | 0 | dnYnRTTTATGh | HOCOMOCOv9 | Integrative | 10 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5100 | 3206 | HXA10_HUMAN | P31260 | |||||
| HXA11_HUMAN.H11MO.0.D |  |
HUMAN:HOXA11 | 13 | D | 0 | WWWhnWTTTAhdd | HOCOMOCOv10 | HT-SELEX | 2642 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5101 | 3207 | HXA11_HUMAN | P31270 | |||||
| HXA13_HUMAN.H11MO.0.C |  |
HUMAN:HOXA13 | 11 | C | 0 | vdTWTTATKGS | HOCOMOCOv9 | Integrative | 18 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5102 | 3209 | HXA13_HUMAN | P31271 | |||||
| HXA9_HUMAN.H11MO.0.B |  |
HUMAN:HOXA9 | 11 | B | 0 | dTGATTKAYdd | HOCOMOCOv11 | ChIP-Seq | 0.883 | 0.757 | 5 | 8 | 500 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5109 | 3205 | HXA9_HUMAN | P31269 | |
| HXB13_HUMAN.H11MO.0.A |  |
HUMAN:HOXB13 | 10 | A | 0 | YTTTATdRvn | HOCOMOCOv11 | ChIP-Seq | 0.846 | 9 | 500 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5112 | 10481 | HXB13_HUMAN | Q92826 | |||
| HXC10_HUMAN.H11MO.0.D |  |
HUMAN:HOXC10 | 19 | D | 0 | ddWWWddnndKTTWAYddb | HOCOMOCOv10 | HT-SELEX | 9418 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5122 | 3226 | HXC10_HUMAN | Q9NYD6 | |||||
| HXC11_HUMAN.H11MO.0.D |  |
HUMAN:HOXC11 | 11 | D | 0 | dKTTWAYKRbh | HOCOMOCOv10 | HT-SELEX | 318 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5123 | 3227 | HXC11_HUMAN | O43248 | |||||
| HXC12_HUMAN.H11MO.0.D |  |
HUMAN:HOXC12 | 12 | D | 0 | dWTTTAYKRYbb | HOCOMOCOv10 | HT-SELEX | 2466 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5124 | 3228 | HXC12_HUMAN | P31275 | |||||
| HXC13_HUMAN.H11MO.0.D |  |
HUMAN:HOXC13 | 11 | D | 0 | ndTTTTACbvb | HOCOMOCOv10 | HT-SELEX | 1231 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5125 | 3229 | HXC13_HUMAN | P31276 | |||||
| HXC9_HUMAN.H11MO.0.C |  |
HUMAN:HOXC9 | 10 | C | 0 | hTTWATKGSh | HOCOMOCOv11 | ChIP-Seq | 0.871 | 2 | 500 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5130 | 3225 | HXC9_HUMAN | P31274 | |||
| HXD10_HUMAN.H11MO.0.D |  |
HUMAN:HOXD10 | 10 | D | 0 | TGnTYTWRTK | HOCOMOCOv9 | Integrative | 7 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5133 | 3236 | HXD10_HUMAN | P28358 | |||||
| HXD11_HUMAN.H11MO.0.D |  |
HUMAN:HOXD11 | 11 | D | 0 | dhTTTATKdnn | HOCOMOCOv10 | HT-SELEX | 124 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5134 | 3237 | HXD11_HUMAN | P31277 | |||||
| HXD12_HUMAN.H11MO.0.D |  |
HUMAN:HOXD12 | 11 | D | 0 | nnKTTTAnbdn | HOCOMOCOv10 | HT-SELEX | 8291 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5135 | 3238 | HXD12_HUMAN | P35452 | |||||
| HXD13_HUMAN.H11MO.0.D |  |
HUMAN:HOXD13 | 11 | D | 0 | WTTAYKRKRGM | HOCOMOCOv9 | Integrative | 13 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5136 | 3239 | HXD13_HUMAN | P35453 | |||||
| HXD9_HUMAN.H11MO.0.D |  |
HUMAN:HOXD9 | 10 | D | 0 | AnWTTnATnn | HOCOMOCOv9 | Integrative | 6 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5140 | 3235 | HXD9_HUMAN | P28356 | |||||
| HXA9_HUMAN.H11DI.0.B |  |
HUMAN:HOXA9 | 14 | B | 0 | ndTGATTYAYddbh | HOCOMOCOv11 | ChIP-Seq | 0.914 | 0.76 | 5 | 8 | 502 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5109 | 3205 | HXA9_HUMAN | P31269 | |
| HXB13_HUMAN.H11DI.0.A |  |
HUMAN:HOXB13 | 16 | A | 0 | dKTTTATKRbnhddbh | HOCOMOCOv11 | ChIP-Seq | 0.887 | 9 | 507 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5112 | 10481 | HXB13_HUMAN | Q92826 | |||
| HXC9_HUMAN.H11DI.0.C |  |
HUMAN:HOXC9 | 12 | C | 0 | nWTTWATKRShn | HOCOMOCOv11 | ChIP-Seq | 0.877 | 2 | 503 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 5130 | 3225 | HXC9_HUMAN | P31274 | |||
| HXA10_MOUSE.H11MO.0.C |  |
MOUSE:Hoxa10 | 12 | C | 0 | dnYnRTTTATGh | HOCOMOCOv9 | Integrative | 10 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96171 | 15395 | HXA10_MOUSE | P31310 | |||||
| HXA13_MOUSE.H11MO.0.C |  |
MOUSE:Hoxa13 | 11 | C | 0 | vdTWTTATKGS | HOCOMOCOv9 | Integrative | 18 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96173 | 15398 | HXA13_MOUSE | Q62424 | |||||
| HXA9_MOUSE.H11MO.0.B |  |
MOUSE:Hoxa9 | 11 | B | 0 | dTGATTKAYdd | HOCOMOCOv11 | ChIP-Seq | 0.883 | 0.757 | 5 | 8 | 500 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96180 | 15405 | HXA9_MOUSE | P09631 | |
| HXC9_MOUSE.H11MO.0.A |  |
MOUSE:Hoxc9 | 12 | A | 0 | WRATTdAYdRbh | HOCOMOCOv11 | ChIP-Seq | 0.955 | 7 | 500 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96199 | 15427 | HXC9_MOUSE | P09633 | |||
| HXD10_MOUSE.H11MO.0.D |  |
MOUSE:Hoxd10 | 10 | D | 0 | TGnTYTWRTK | HOCOMOCOv9 | Integrative | 7 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96202 | 15430 | HXD10_MOUSE | P28359 | |||||
| HXD13_MOUSE.H11MO.0.D |  |
MOUSE:Hoxd13 | 11 | D | 0 | WTTAYKRKRGM | HOCOMOCOv9 | Integrative | 13 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96205 | 15433 | HXD13_MOUSE | P70217 | |||||
| HXD9_MOUSE.H11MO.0.D |  |
MOUSE:Hoxd9 | 10 | D | 0 | AnWTTnATnn | HOCOMOCOv9 | Integrative | 6 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96210 | 15438 | HXD9_MOUSE | P28357 | |||||
| HXA9_MOUSE.H11DI.0.A |  |
MOUSE:Hoxa9 | 14 | A | 0 | ndTGAYKKATKdbn | HOCOMOCOv11 | ChIP-Seq | 0.906 | 0.819 | 5 | 8 | 503 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96180 | 15405 | HXA9_MOUSE | P09631 | |
| HXC9_MOUSE.H11DI.0.A |  |
MOUSE:Hoxc9 | 14 | A | 0 | nWRATTTAYdRbbn | HOCOMOCOv11 | ChIP-Seq | 0.958 | 7 | 500 | HOX-related factors{3.1.1} | HOX9-13{3.1.1.8} | 96199 | 15427 | HXC9_MOUSE | P09633 |