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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
MAX_HUMAN.H11MO.0.A HUMAN:MAX 10 A 0 vnSCACGYGK HOCOMOCOv11 ChIP-Seq 0.95 0.947 86 14 501 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 6913 4149 MAX_HUMAN P61244
MGAP_HUMAN.H11MO.0.D HUMAN:MGA 16 D 0 RRGTGTKAnWTWTMRC HOCOMOCOv10 HT-SELEX 6178 bHLH-ZIP factors{1.2.6};
TBX6-related factors{6.5.5}		 Mad-like factors{1.2.6.7};
MGA (MAD5){6.5.5.0.2}		 14010 23269 MGAP_HUMAN Q8IWI9
MITF_HUMAN.H11MO.0.A HUMAN:MITF 10 A 0 YCACGTGACh HOCOMOCOv11 ChIP-Seq 0.999 0.824 28 3 516 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 7105 4286 MITF_HUMAN O75030
MLXPL_HUMAN.H11MO.0.D HUMAN:MLXIPL 19 D 0 SCAYGKGRMMMYnbSGTGb HOCOMOCOv9 Integrative 11 bHLH-ZIP factors{1.2.6} Mondo-like factors{1.2.6.6} 12744 51085 MLXPL_HUMAN Q9NP71
MLX_HUMAN.H11MO.0.D HUMAN:MLX 11 D 0 hdRWCACGTGn HOCOMOCOv10 HT-SELEX 18958 bHLH-ZIP factors{1.2.6} Mondo-like factors{1.2.6.6} 11645 6945 MLX_HUMAN Q9UH92
MXI1_HUMAN.H11MO.0.A HUMAN:MXI1 15 A 0 vCACRYGKvnSbbbv HOCOMOCOv10 ChIP-Seq 0.878 0.973 10 5 500 bHLH-ZIP factors{1.2.6} Mad-like factors{1.2.6.7} 7534 4601 MXI1_HUMAN P50539
MXI1_HUMAN.H11MO.1.A HUMAN:MXI1 11 A 1 SMCACRTGbhb HOCOMOCOv11 ChIP-Seq 0.871 0.96 10 5 500 bHLH-ZIP factors{1.2.6} Mad-like factors{1.2.6.7} 7534 4601 MXI1_HUMAN P50539
MYCN_HUMAN.H11MO.0.A HUMAN:MYCN 12 A 0 vRvCACGTGbdv HOCOMOCOv11 ChIP-Seq 0.919 0.899 32 10 501 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 7559 4613 MYCN_HUMAN P04198
MYC_HUMAN.H11MO.0.A HUMAN:MYC 11 A 0 vMCACGTGShb HOCOMOCOv11 ChIP-Seq 0.947 0.948 265 126 501 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 7553 4609 MYC_HUMAN P01106
SRBP1_HUMAN.H11MO.0.A HUMAN:SREBF1 11 A 0 dRKSRSGTGAb HOCOMOCOv11 ChIP-Seq 0.92 0.67 5 23 500 bHLH-ZIP factors{1.2.6} SREBP factors{1.2.6.3} 11289 6720 SRBP1_HUMAN P36956
SRBP2_HUMAN.H11MO.0.B HUMAN:SREBF2 13 B 0 vvvWGGvSWGRnb HOCOMOCOv9 Integrative 2363 bHLH-ZIP factors{1.2.6} SREBP factors{1.2.6.3} 11290 6721 SRBP2_HUMAN Q12772
TFAP4_HUMAN.H11MO.0.A HUMAN:TFAP4 10 A 0 hCAGCTGdKb HOCOMOCOv11 ChIP-Seq 0.923 7 503 bHLH-ZIP factors{1.2.6} AP-4{1.2.6.4} 11745 7023 TFAP4_HUMAN Q01664
TFE3_HUMAN.H11MO.0.B HUMAN:TFE3 10 B 0 dGTCACGTGA HOCOMOCOv11 ChIP-Seq 0.483 1.0 2 30 478 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 11752 7030 TFE3_HUMAN P19532
TFEB_HUMAN.H11MO.0.C HUMAN:TFEB 9 C 0 dGTCACGTG HOCOMOCOv9 Integrative 301 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 11753 7942 TFEB_HUMAN P19484
USF1_HUMAN.H11MO.0.A HUMAN:USF1 12 A 0 vGTCACGTGvbb HOCOMOCOv11 ChIP-Seq 0.998 0.98 59 7 485 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 12593 7391 USF1_HUMAN P22415
USF2_HUMAN.H11MO.0.A HUMAN:USF2 19 A 0 vvGTCACGTGvbvvbbvbb HOCOMOCOv10 ChIP-Seq 0.998 0.998 23 10 501 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 12594 7392 USF2_HUMAN Q15853
MAX_HUMAN.H11DI.0.A HUMAN:MAX 23 A 0 nvnnnnnvnvnvdvCACGTGbbn HOCOMOCOv10 ChIP-Seq 0.955 0.968 86 14 514 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 6913 4149 MAX_HUMAN P61244
MITF_HUMAN.H11DI.0.A HUMAN:MITF 13 A 0 nvYCACGTGAChn HOCOMOCOv11 ChIP-Seq 0.999 0.816 28 3 518 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 7105 4286 MITF_HUMAN O75030
MXI1_HUMAN.H11DI.0.A HUMAN:MXI1 23 A 0 nvvvCAYGTGSvnvvnbvvvnbn HOCOMOCOv10 ChIP-Seq 0.897 0.981 10 5 500 bHLH-ZIP factors{1.2.6} Mad-like factors{1.2.6.7} 7534 4601 MXI1_HUMAN P50539
MYCN_HUMAN.H11DI.0.A HUMAN:MYCN 12 A 0 nvvvCACGTGKv HOCOMOCOv11 ChIP-Seq 0.935 0.899 32 10 402 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 7559 4613 MYCN_HUMAN P04198
MYC_HUMAN.H11DI.0.A HUMAN:MYC 15 A 0 nvCCACGTGbnbdvn HOCOMOCOv11 ChIP-Seq 0.951 0.948 265 126 116 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 7553 4609 MYC_HUMAN P01106
SRBP1_HUMAN.H11DI.0.A HUMAN:SREBF1 12 A 0 nvTSRSGTGAbn HOCOMOCOv11 ChIP-Seq 0.919 0.699 5 23 603 bHLH-ZIP factors{1.2.6} SREBP factors{1.2.6.3} 11289 6720 SRBP1_HUMAN P36956
TFAP4_HUMAN.H11DI.0.A HUMAN:TFAP4 14 A 0 hCAGCTGdKbnvvn HOCOMOCOv11 ChIP-Seq 0.924 7 502 bHLH-ZIP factors{1.2.6} AP-4{1.2.6.4} 11745 7023 TFAP4_HUMAN Q01664
TFE3_HUMAN.H11DI.0.B HUMAN:TFE3 12 B 0 ndGTCAYGTGAb HOCOMOCOv11 ChIP-Seq 0.503 1.0 2 30 437 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 11752 7030 TFE3_HUMAN P19532
USF1_HUMAN.H11DI.0.A HUMAN:USF1 23 A 0 vvbnvvnbbnvGTCACGTGvbbn HOCOMOCOv10 ChIP-Seq 0.999 0.985 59 7 500 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 12593 7391 USF1_HUMAN P22415
USF2_HUMAN.H11DI.0.A HUMAN:USF2 23 A 0 ndGTCACGTGvbbnvnnbnvnbb HOCOMOCOv10 ChIP-Seq 0.998 0.999 23 10 517 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 12594 7392 USF2_HUMAN Q15853
MAX_MOUSE.H11MO.0.A MOUSE:Max 11 A 0 vvvCACGYGSv HOCOMOCOv11 ChIP-Seq 0.939 0.961 86 14 505 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 96921 MAX_MOUSE P28574
MITF_MOUSE.H11MO.0.A MOUSE:Mitf 10 A 0 bChYGTGMYh HOCOMOCOv11 ChIP-Seq 0.996 0.835 28 3 501 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 104554 17342 MITF_MOUSE Q08874
MLXPL_MOUSE.H11MO.0.D MOUSE:Mlxipl 19 D 0 SCAYGKGRMMMYnbSGTGb HOCOMOCOv9 Integrative 11 bHLH-ZIP factors{1.2.6} Mondo-like factors{1.2.6.6} 1927999 58805 MLXPL_MOUSE Q99MZ3
MXI1_MOUSE.H11MO.0.A MOUSE:Mxi1 15 A 0 vCACRYGKvnSbbbv HOCOMOCOv10 ChIP-Seq 0.878 0.973 10 5 500 bHLH-ZIP factors{1.2.6} Mad-like factors{1.2.6.7} 97245 17859 MXI1_MOUSE P50540
MXI1_MOUSE.H11MO.1.A MOUSE:Mxi1 8 A 1 hCRCGTGS HOCOMOCOv11 ChIP-Seq 0.856 0.973 10 5 510 bHLH-ZIP factors{1.2.6} Mad-like factors{1.2.6.7} 97245 17859 MXI1_MOUSE P50540
MYCN_MOUSE.H11MO.0.A MOUSE:Mycn 8 A 0 SCRCGTGK HOCOMOCOv11 ChIP-Seq 0.897 0.928 32 10 508 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 97357 18109 MYCN_MOUSE P03966
MYC_MOUSE.H11MO.0.A MOUSE:Myc 12 A 0 vvMCWCGTGSbS HOCOMOCOv11 ChIP-Seq 0.917 0.957 265 126 501 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 97250 17869 MYC_MOUSE P01108
SRBP1_MOUSE.H11MO.0.B MOUSE:Srebf1 11 B 0 vRTSRSSWGWb HOCOMOCOv9 Integrative 0.893 0.735 5 23 2191 bHLH-ZIP factors{1.2.6} SREBP factors{1.2.6.3} 107606 20787 SRBP1_MOUSE Q9WTN3
SRBP2_MOUSE.H11MO.0.B MOUSE:Srebf2 13 B 0 vvvWGGvSWGRnb HOCOMOCOv9 Integrative 2363 bHLH-ZIP factors{1.2.6} SREBP factors{1.2.6.3} 107585 20788 SRBP2_MOUSE Q3U1N2
TFE3_MOUSE.H11MO.0.A MOUSE:Tfe3 10 A 0 dGTCACGTGA HOCOMOCOv11 ChIP-Seq 0.483 1.0 2 30 478 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 98511 209446 TFE3_MOUSE Q64092
TFEB_MOUSE.H11MO.0.C MOUSE:Tfeb 9 C 0 dGTCACGTG HOCOMOCOv9 Integrative 301 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 103270 21425 TFEB_MOUSE Q9R210
USF1_MOUSE.H11MO.0.A MOUSE:Usf1 13 A 0 vvGTCACGTGnbS HOCOMOCOv11 ChIP-Seq 0.998 0.987 59 7 461 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 99542 22278 USF1_MOUSE Q61069
USF2_MOUSE.H11MO.0.A MOUSE:Usf2 19 A 0 vvGTCACGTGvbvvbbvbb HOCOMOCOv10 ChIP-Seq 0.998 0.998 23 10 501 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 99961 22282 USF2_MOUSE Q64705
MAX_MOUSE.H11DI.0.A MOUSE:Max 23 A 0 nvnnnnnvnvnvdvCACGTGbbn HOCOMOCOv10 ChIP-Seq 0.955 0.968 86 14 514 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 96921 MAX_MOUSE P28574
MITF_MOUSE.H11DI.0.A MOUSE:Mitf 12 A 0 nbChYGTGAShn HOCOMOCOv11 ChIP-Seq 0.995 0.839 28 3 507 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 104554 17342 MITF_MOUSE Q08874
MXI1_MOUSE.H11DI.0.A MOUSE:Mxi1 23 A 0 nvvvCAYGTGSvnvvnbvvvnbn HOCOMOCOv10 ChIP-Seq 0.897 0.981 10 5 500 bHLH-ZIP factors{1.2.6} Mad-like factors{1.2.6.7} 97245 17859 MXI1_MOUSE P50540
MYCN_MOUSE.H11DI.0.A MOUSE:Mycn 15 A 0 vRvbMACRWGSnvvv HOCOMOCOv11 ChIP-Seq 0.921 0.961 32 10 493 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 97357 18109 MYCN_MOUSE P03966
MYC_MOUSE.H11DI.0.A MOUSE:Myc 15 A 0 bvvvvvvMCACGTGb HOCOMOCOv11 ChIP-Seq 0.909 0.963 265 126 450 bHLH-ZIP factors{1.2.6} Myc / Max factors{1.2.6.5} 97250 17869 MYC_MOUSE P01108
SRBP1_MOUSE.H11DI.0.B MOUSE:Srebf1 12 B 0 nvTSRSGTGAbn HOCOMOCOv11 ChIP-Seq 0.919 0.699 5 23 603 bHLH-ZIP factors{1.2.6} SREBP factors{1.2.6.3} 107606 20787 SRBP1_MOUSE Q9WTN3
TFE3_MOUSE.H11DI.0.A MOUSE:Tfe3 13 A 0 ndGTCACGTGRbn HOCOMOCOv11 ChIP-Seq 0.471 1.0 2 30 525 bHLH-ZIP factors{1.2.6} TFE3-like factors{1.2.6.1} 98511 209446 TFE3_MOUSE Q64092
USF1_MOUSE.H11DI.0.A MOUSE:Usf1 23 A 0 vvbnvvnbbnvGTCACGTGvbbn HOCOMOCOv10 ChIP-Seq 0.999 0.985 59 7 500 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 99542 22278 USF1_MOUSE Q61069
USF2_MOUSE.H11DI.0.A MOUSE:Usf2 23 A 0 ndGTCACGTGvbbnvnnbnvnbb HOCOMOCOv10 ChIP-Seq 0.998 0.999 23 10 517 bHLH-ZIP factors{1.2.6} USF factors{1.2.6.2} 99961 22282 USF2_MOUSE Q64705