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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
BCL6B_HUMAN.H11MO.0.D HUMAN:BCL6B 11 D 0 nYGCTTTCTAG HOCOMOCOv10 HT-SELEX 66 More than 3 adjacent zinc finger factors{2.3.3} BCL6 factors{2.3.3.22} 1002 255877 BCL6B_HUMAN Q8N143
BCL6_HUMAN.H11MO.0.A HUMAN:BCL6 13 A 0 bdMYYTCYAGGAA HOCOMOCOv11 ChIP-Seq 0.802 0.874 27 11 500 More than 3 adjacent zinc finger factors{2.3.3} BCL6 factors{2.3.3.22} 1001 604 BCL6_HUMAN P41182
FEZF1_HUMAN.H11MO.0.C HUMAN:FEZF1 12 C 0 dhTGYYYWTTYh HOCOMOCOv11 ChIP-Seq 0.801 3 500 More than 3 adjacent zinc finger factors{2.3.3} FEZF factors{2.3.3.20} 22788 389549 FEZF1_HUMAN A0PJY2
GFI1B_HUMAN.H11MO.0.A HUMAN:GFI1B 10 A 0 RYWSWGATTK HOCOMOCOv11 ChIP-Seq 0.891 0.887 3 24 503 More than 3 adjacent zinc finger factors{2.3.3} GFI1 factors{2.3.3.21} 4238 8328 GFI1B_HUMAN Q5VTD9
GFI1_HUMAN.H11MO.0.C HUMAN:GFI1 10 C 0 RShSWGATTb HOCOMOCOv9 Integrative 152 More than 3 adjacent zinc finger factors{2.3.3} GFI1 factors{2.3.3.21} 4237 2672 GFI1_HUMAN Q99684
MTF1_HUMAN.H11MO.0.C HUMAN:MTF1 17 C 0 vGKRMCGKGTGCAdMdb HOCOMOCOv9 Integrative 33 More than 3 adjacent zinc finger factors{2.3.3} MTF1-like factors{2.3.3.24} 7428 4520 MTF1_HUMAN Q14872
PLAG1_HUMAN.H11MO.0.D HUMAN:PLAG1 17 D 0 RGGGGSMhndRdMGGGK HOCOMOCOv9 Integrative 25 More than 3 adjacent zinc finger factors{2.3.3} PLAG factors{2.3.3.25} 9045 5324 PLAG1_HUMAN Q6DJT9
PLAL1_HUMAN.H11MO.0.D HUMAN:PLAGL1 10 D 0 vRGGGGGCCY HOCOMOCOv9 Integrative 12 More than 3 adjacent zinc finger factors{2.3.3} PLAG factors{2.3.3.25} 9046 5325 PLAL1_HUMAN Q9UM63
SCRT1_HUMAN.H11MO.0.D HUMAN:SCRT1 13 D 0 KCAACAGGTKdbh HOCOMOCOv10 HT-SELEX 179 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 15950 83482 SCRT1_HUMAN Q9BWW7
SCRT2_HUMAN.H11MO.0.D HUMAN:SCRT2 13 D 0 dhKCAACAGGTKb HOCOMOCOv10 HT-SELEX 719 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 15952 85508 SCRT2_HUMAN Q9NQ03
SNAI1_HUMAN.H11MO.0.C HUMAN:SNAI1 8 C 0 vCAGGTGb HOCOMOCOv9 Integrative 5 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 11128 6615 SNAI1_HUMAN O95863
SNAI2_HUMAN.H11MO.0.A HUMAN:SNAI2 10 A 0 dRCAGGTGYn HOCOMOCOv11 ChIP-Seq 0.983 0.84 11 3 500 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 11094 6591 SNAI2_HUMAN O43623
ZKSC3_HUMAN.H11MO.0.D HUMAN:ZKSCAN3 11 D 0 bbYRAGGYTAd HOCOMOCOv10 HT-SELEX 138 More than 3 adjacent zinc finger factors{2.3.3} ZKSCAN3-like factors{2.3.3.26} 13853 80317 ZKSC3_HUMAN Q9BRR0
ZN143_HUMAN.H11MO.0.A HUMAN:ZNF143 22 A 0 dGSMYbMTGGGAddYGTAGTYY HOCOMOCOv11 ChIP-Seq 0.986 0.983 28 9 500 More than 3 adjacent zinc finger factors{2.3.3} ZNF76-like factors{2.3.3.28} 12928 7702 ZN143_HUMAN P52747
ZN410_HUMAN.H11MO.0.D HUMAN:ZNF410 13 D 0 TATTATGGGATGb HOCOMOCOv10 HT-SELEX 1227 More than 3 adjacent zinc finger factors{2.3.3} MTF1-like factors{2.3.3.24} 20144 57862 ZN410_HUMAN Q86VK4
ZN652_HUMAN.H11MO.0.D HUMAN:ZNF652 11 D 0 nRdKGGTTAAh HOCOMOCOv10 HT-SELEX 236 More than 3 adjacent zinc finger factors{2.3.3} ZNF652-like factors{2.3.3.29} 29147 22834 ZN652_HUMAN Q9Y2D9
ZNF76_HUMAN.H11MO.0.C HUMAN:ZNF76 22 C 0 vddGSMYbSTGGGAvdKSKRRK HOCOMOCOv11 ChIP-Seq 0.985 4 498 More than 3 adjacent zinc finger factors{2.3.3} ZNF76-like factors{2.3.3.28} 13149 7629 ZNF76_HUMAN P36508
BCL6_HUMAN.H11DI.0.A HUMAN:BCL6 16 A 0 nvnhdhbAGGAAvhdn HOCOMOCOv11 ChIP-Seq 0.913 0.948 27 11 502 More than 3 adjacent zinc finger factors{2.3.3} BCL6 factors{2.3.3.22} 1001 604 BCL6_HUMAN P41182
FEZF1_HUMAN.H11DI.0.C HUMAN:FEZF1 15 C 0 nhKbYCWTTTbnndn HOCOMOCOv11 ChIP-Seq 0.842 3 514 More than 3 adjacent zinc finger factors{2.3.3} FEZF factors{2.3.3.20} 22788 389549 FEZF1_HUMAN A0PJY2
GFI1B_HUMAN.H11DI.0.A HUMAN:GFI1B 14 A 0 nKYWbWGRTTTnhn HOCOMOCOv11 ChIP-Seq 0.887 0.891 3 24 537 More than 3 adjacent zinc finger factors{2.3.3} GFI1 factors{2.3.3.21} 4238 8328 GFI1B_HUMAN Q5VTD9
SNAI2_HUMAN.H11DI.0.A HUMAN:SNAI2 12 A 0 ndRCAGGTGYnn HOCOMOCOv11 ChIP-Seq 0.985 0.893 11 3 517 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 11094 6591 SNAI2_HUMAN O43623
ZN143_HUMAN.H11DI.0.A HUMAN:ZNF143 25 A 0 SYvvdGSMYbMTGGGARdTGTAGTY HOCOMOCOv11 ChIP-Seq 0.993 0.987 28 9 386 More than 3 adjacent zinc finger factors{2.3.3} ZNF76-like factors{2.3.3.28} 12928 7702 ZN143_HUMAN P52747
ZNF76_HUMAN.H11DI.0.C HUMAN:ZNF76 25 C 0 SCvvdGSMTbMTGGGAvdTGTAGTY HOCOMOCOv11 ChIP-Seq 0.979 4 328 More than 3 adjacent zinc finger factors{2.3.3} ZNF76-like factors{2.3.3.28} 13149 7629 ZNF76_HUMAN P36508
BCL6_MOUSE.H11MO.0.A MOUSE:Bcl6 13 A 0 hnMWYTCYAGGRW HOCOMOCOv11 ChIP-Seq 0.797 0.885 27 11 500 More than 3 adjacent zinc finger factors{2.3.3} BCL6 factors{2.3.3.22} 107187 12053 BCL6_MOUSE P41183
GFI1B_MOUSE.H11MO.0.A MOUSE:Gfi1b 10 A 0 dYWSTGRTTK HOCOMOCOv11 ChIP-Seq 0.862 0.888 3 24 503 More than 3 adjacent zinc finger factors{2.3.3} GFI1 factors{2.3.3.21} 1276578 14582 GFI1B_MOUSE O70237
GFI1_MOUSE.H11MO.0.C MOUSE:Gfi1 10 C 0 RShSWGATTb HOCOMOCOv9 Integrative 152 More than 3 adjacent zinc finger factors{2.3.3} GFI1 factors{2.3.3.21} 103170 14581 GFI1_MOUSE P70338
MTF1_MOUSE.H11MO.0.C MOUSE:Mtf1 17 C 0 vGKRMCGKGTGCAdMdb HOCOMOCOv9 Integrative 33 More than 3 adjacent zinc finger factors{2.3.3} MTF1-like factors{2.3.3.24} 101786 17764 MTF1_MOUSE Q07243
PLAG1_MOUSE.H11MO.0.D MOUSE:Plag1 17 D 0 RGGGGSMhndRdMGGGK HOCOMOCOv9 Integrative 25 More than 3 adjacent zinc finger factors{2.3.3} PLAG factors{2.3.3.25} 1891916 56711 PLAG1_MOUSE Q9QYE0
SNAI1_MOUSE.H11MO.0.C MOUSE:Snai1 8 C 0 vCAGGTGb HOCOMOCOv9 Integrative 5 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 98330 20613 SNAI1_MOUSE Q02085
SNAI2_MOUSE.H11MO.0.A MOUSE:Snai2 11 A 0 dRCAGGTGYnb HOCOMOCOv11 ChIP-Seq 0.974 0.875 11 3 494 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 1096393 20583 SNAI2_MOUSE P97469
ZN143_MOUSE.H11MO.0.A MOUSE:Znf143 22 A 0 dGShYbMTGGGAvdTGTAGTYY HOCOMOCOv11 ChIP-Seq 0.982 0.979 28 9 463 More than 3 adjacent zinc finger factors{2.3.3} ZNF76-like factors{2.3.3.28} 1277969 20841 ZN143_MOUSE O70230
BCL6_MOUSE.H11DI.0.A MOUSE:Bcl6 16 A 0 nndMYbTCYAGKRAhn HOCOMOCOv10 ChIP-Seq 0.828 0.892 27 11 504 More than 3 adjacent zinc finger factors{2.3.3} BCL6 factors{2.3.3.22} 107187 12053 BCL6_MOUSE P41183
GFI1B_MOUSE.H11DI.0.A MOUSE:Gfi1b 12 A 0 dKCWSWGATTKn HOCOMOCOv11 ChIP-Seq 0.881 0.899 3 24 524 More than 3 adjacent zinc finger factors{2.3.3} GFI1 factors{2.3.3.21} 1276578 14582 GFI1B_MOUSE O70237
SNAI2_MOUSE.H11DI.0.A MOUSE:Snai2 13 A 0 ndRCAGGTGYnbb HOCOMOCOv11 ChIP-Seq 0.976 0.94 11 3 417 More than 3 adjacent zinc finger factors{2.3.3} Snail-like factors{2.3.3.2} 1096393 20583 SNAI2_MOUSE P97469
ZN143_MOUSE.H11DI.0.A MOUSE:Znf143 25 A 0 SCRvdGSMYbMTGGGAvdYGTAGTY HOCOMOCOv11 ChIP-Seq 0.999 0.992 28 9 465 More than 3 adjacent zinc finger factors{2.3.3} ZNF76-like factors{2.3.3.28} 1277969 20841 ZN143_MOUSE O70230