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PWMs for transcription factors
Model Transcription factor Model length Quality
 Model rank Consensus Model release Data source Best auROC (human) Best auROC (mouse) Peak sets in benchmark (human) Peak sets in benchmark (mouse) Aligned words TF family TF subfamily HGNC MGI EntrezGene UniProt ID UniProt AC
GLI1_HUMAN.H11MO.0.D HUMAN:GLI1 12 D 0 bSTGGGTGGYCh HOCOMOCOv11 ChIP-Seq 0.561 0.974 2 3 500 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 4317 2735 GLI1_HUMAN P08151
GLI2_HUMAN.H11MO.0.D HUMAN:GLI2 11 D 0 STGGGTGGTCb HOCOMOCOv9 Integrative 970 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 4318 2736 GLI2_HUMAN P10070
GLI3_HUMAN.H11MO.0.B HUMAN:GLI3 11 B 0 nTGGGTGGTYb HOCOMOCOv9 Integrative 15 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 4319 2737 GLI3_HUMAN P10071
GLIS1_HUMAN.H11MO.0.D HUMAN:GLIS1 13 D 0 hYGYGGGGGGTMd HOCOMOCOv10 HT-SELEX 492 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 29525 148979 GLIS1_HUMAN Q8NBF1
GLIS2_HUMAN.H11MO.0.D HUMAN:GLIS2 14 D 0 SdhYGYGGGGGGTv HOCOMOCOv10 HT-SELEX 1681 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 29450 84662 GLIS2_HUMAN Q9BZE0
GLIS3_HUMAN.H11MO.0.D HUMAN:GLIS3 10 D 0 SYGGGGGGTM HOCOMOCOv9 Integrative 38 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 28510 169792 GLIS3_HUMAN Q8NEA6
OVOL1_HUMAN.H11MO.0.C HUMAN:OVOL1 9 C 0 KGTAACKGT HOCOMOCOv9 Integrative 7 More than 3 adjacent zinc finger factors{2.3.3} OVOL-factors{2.3.3.17} 8525 5017 OVOL1_HUMAN O14753
OVOL2_HUMAN.H11MO.0.D HUMAN:OVOL2 8 D 0 dTAACGGd HOCOMOCOv11 ChIP-Seq 0.453 0.952 2 2 197 More than 3 adjacent zinc finger factors{2.3.3} OVOL-factors{2.3.3.17} 15804 58495 OVOL2_HUMAN Q9BRP0
PRDM1_HUMAN.H11MO.0.A HUMAN:PRDM1 14 A 0 RRRAGdGAAAGKdv HOCOMOCOv11 ChIP-Seq 0.959 0.962 12 9 502 More than 3 adjacent zinc finger factors{2.3.3} PRDM1-like factors{2.3.3.12} 9346 639 PRDM1_HUMAN O75626
ZBT18_HUMAN.H11MO.0.C HUMAN:ZBTB18 11 C 0 bSCAGhTGYKb HOCOMOCOv11 ChIP-Seq 0.886 4 500 More than 3 adjacent zinc finger factors{2.3.3} ZNF238-like factors{2.3.3.16} 13030 10472 ZBT18_HUMAN Q99592
ZBTB6_HUMAN.H11MO.0.C HUMAN:ZBTB6 13 C 0 KRhSMTRGAGMYd HOCOMOCOv11 ChIP-Seq 0.884 2 457 More than 3 adjacent zinc finger factors{2.3.3} ZBTB6-like factors{2.3.3.11} 16764 10773 ZBTB6_HUMAN Q15916
ZIC1_HUMAN.H11MO.0.B HUMAN:ZIC1 9 B 0 KGGGWGSKv HOCOMOCOv9 Integrative 34 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 12872 7545 ZIC1_HUMAN Q15915
ZIC2_HUMAN.H11MO.0.D HUMAN:ZIC2 15 D 0 dvhhhCCYGCdGdKn HOCOMOCOv11 ChIP-Seq 0.544 0.977 4 4 410 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 12873 7546 ZIC2_HUMAN O95409
ZIC3_HUMAN.H11MO.0.B HUMAN:ZIC3 15 B 0 dvvbhCCTGCTGdGn HOCOMOCOv11 ChIP-Seq 0.943 5 170 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 12874 7547 ZIC3_HUMAN O60481
ZIC4_HUMAN.H11MO.0.D HUMAN:ZIC4 15 D 0 dMdCMGCGGGGGKYv HOCOMOCOv10 HT-SELEX 4313 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 20393 84107 ZIC4_HUMAN Q8N9L1
ZKSC1_HUMAN.H11MO.0.B HUMAN:ZKSCAN1 19 B 0 dvhdbhCCTACTRWGYGYh HOCOMOCOv11 ChIP-Seq 0.961 6 500 More than 3 adjacent zinc finger factors{2.3.3} ZNF24-like factors{2.3.3.10} 13101 7586 ZKSC1_HUMAN P17029
ZN148_HUMAN.H11MO.0.D HUMAN:ZNF148 15 D 0 dSvKbGGGGGhGGGR HOCOMOCOv9 Integrative 34 More than 3 adjacent zinc finger factors{2.3.3} ZNF148-like factors{2.3.3.13} 12933 7707 ZN148_HUMAN Q9UQR1
ZN232_HUMAN.H11MO.0.D HUMAN:ZNF232 19 D 0 nGTTAAAYGTAGATTAARh HOCOMOCOv10 HT-SELEX 50 More than 3 adjacent zinc finger factors{2.3.3} ZNF24-like factors{2.3.3.10} 13026 7775 ZN232_HUMAN Q9UNY5
ZN281_HUMAN.H11MO.0.A HUMAN:ZNF281 15 A 0 vRvdGGGGGWdGGGv HOCOMOCOv11 ChIP-Seq 0.968 0.972 7 3 482 More than 3 adjacent zinc finger factors{2.3.3} ZNF148-like factors{2.3.3.13} 13075 23528 ZN281_HUMAN Q9Y2X9
ZN524_HUMAN.H11MO.0.D HUMAN:ZNF524 18 D 0 bSKdnbdMGGGTKCGARb HOCOMOCOv10 HT-SELEX 509 More than 3 adjacent zinc finger factors{2.3.3} ZNF524-like factors{2.3.3.15} 28322 147807 ZN524_HUMAN Q96C55
ZSC31_HUMAN.H11MO.0.C HUMAN:ZSCAN31 18 C 0 dKSMGCRGGGCMdKdRdv HOCOMOCOv11 ChIP-Seq 0.802 4 407 More than 3 adjacent zinc finger factors{2.3.3} ZNF24-like factors{2.3.3.10} 14097 64288 ZSC31_HUMAN Q96LW9
GLI1_HUMAN.H11DI.0.B HUMAN:GLI1 17 B 0 nvnnbSTGGGTGGYChn HOCOMOCOv11 ChIP-Seq 0.671 0.953 2 3 501 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 4317 2735 GLI1_HUMAN P08151
OVOL2_HUMAN.H11DI.0.D HUMAN:OVOL2 11 D 0 ndndTAACGGd HOCOMOCOv11 ChIP-Seq 0.454 0.963 2 2 185 More than 3 adjacent zinc finger factors{2.3.3} OVOL-factors{2.3.3.17} 15804 58495 OVOL2_HUMAN Q9BRP0
PRDM1_HUMAN.H11DI.0.A HUMAN:PRDM1 17 A 0 ddRMAGKGAAAGTdhnn HOCOMOCOv10 ChIP-Seq 0.982 0.959 12 9 501 More than 3 adjacent zinc finger factors{2.3.3} PRDM1-like factors{2.3.3.12} 9346 639 PRDM1_HUMAN O75626
ZBT18_HUMAN.H11DI.0.C HUMAN:ZBTB18 16 C 0 bKCCAGMYGWKbvbvn HOCOMOCOv11 ChIP-Seq 0.909 4 321 More than 3 adjacent zinc finger factors{2.3.3} ZNF238-like factors{2.3.3.16} 13030 10472 ZBT18_HUMAN Q99592
ZBTB6_HUMAN.H11DI.0.C HUMAN:ZBTB6 16 C 0 vRRhSMTRGAGChdbn HOCOMOCOv11 ChIP-Seq 0.89 2 543 More than 3 adjacent zinc finger factors{2.3.3} ZBTB6-like factors{2.3.3.11} 16764 10773 ZBTB6_HUMAN Q15916
ZIC2_HUMAN.H11DI.0.D HUMAN:ZIC2 17 D 0 ndvhYhCCTGCKGdGhn HOCOMOCOv11 ChIP-Seq 0.535 0.987 4 4 520 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 12873 7546 ZIC2_HUMAN O95409
ZN281_HUMAN.H11DI.0.A HUMAN:ZNF281 18 A 0 vvdndGGGGGhRGGGvvd HOCOMOCOv11 ChIP-Seq 0.986 0.978 7 3 561 More than 3 adjacent zinc finger factors{2.3.3} ZNF148-like factors{2.3.3.13} 13075 23528 ZN281_HUMAN Q9Y2X9
ZSC31_HUMAN.H11DI.0.C HUMAN:ZSCAN31 23 C 0 vbhRKSvGMWGGGChvKdRKRvh HOCOMOCOv11 ChIP-Seq 0.914 4 270 More than 3 adjacent zinc finger factors{2.3.3} ZNF24-like factors{2.3.3.10} 14097 64288 ZSC31_HUMAN Q96LW9
GLI1_MOUSE.H11MO.0.C MOUSE:Gli1 12 C 0 bSTGGGTGGYCh HOCOMOCOv11 ChIP-Seq 0.561 0.974 2 3 500 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 95727 14632 GLI1_MOUSE P47806
GLI2_MOUSE.H11MO.0.D MOUSE:Gli2 11 D 0 STGGGTGGTCb HOCOMOCOv9 Integrative 970 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 95728 14633 GLI2_MOUSE Q0VGT2
GLI3_MOUSE.H11MO.0.D MOUSE:Gli3 12 D 0 bbWGKGTGGbYb HOCOMOCOv11 ChIP-Seq 0.52 0.752 2 3 476 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 95729 14634 GLI3_MOUSE Q61602
GLIS3_MOUSE.H11MO.0.D MOUSE:Glis3 10 D 0 SYGGGGGGTM HOCOMOCOv9 Integrative 38 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 2444289 226075 GLIS3_MOUSE Q6XP49
OVOL1_MOUSE.H11MO.0.C MOUSE:Ovol1 9 C 0 KGTAACKGT HOCOMOCOv9 Integrative 7 More than 3 adjacent zinc finger factors{2.3.3} OVOL-factors{2.3.3.17} 1330290 18426 OVOL1_MOUSE Q9WTJ2
OVOL2_MOUSE.H11MO.0.C MOUSE:Ovol2 8 C 0 dTAACGGd HOCOMOCOv11 ChIP-Seq 0.453 0.952 2 2 197 More than 3 adjacent zinc finger factors{2.3.3} OVOL-factors{2.3.3.17} 1338039 107586 OVOL2_MOUSE Q8CIV7
PRDM1_MOUSE.H11MO.0.A MOUSE:Prdm1 14 A 0 RRRAGdGAAAGKdv HOCOMOCOv11 ChIP-Seq 0.959 0.962 12 9 502 More than 3 adjacent zinc finger factors{2.3.3} PRDM1-like factors{2.3.3.12} 99655 12142 PRDM1_MOUSE Q60636
ZBT18_MOUSE.H11MO.0.D MOUSE:Zbtb18 11 D 0 bSCAGhTGYKb HOCOMOCOv11 ChIP-Seq 0.886 4 500 More than 3 adjacent zinc finger factors{2.3.3} ZNF238-like factors{2.3.3.16} 1353609 30928 ZBT18_MOUSE Q9WUK6
ZBTB6_MOUSE.H11MO.0.D MOUSE:Zbtb6 13 D 0 KRhSMTRGAGMYd HOCOMOCOv11 ChIP-Seq 0.884 2 457 More than 3 adjacent zinc finger factors{2.3.3} ZBTB6-like factors{2.3.3.11} 2442998 241322 ZBTB6_MOUSE Q8K088
ZIC1_MOUSE.H11MO.0.B MOUSE:Zic1 9 B 0 KGGGWGSKv HOCOMOCOv9 Integrative 34 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 106683 22771 ZIC1_MOUSE P46684
ZIC2_MOUSE.H11MO.0.C MOUSE:Zic2 15 C 0 dRvYnCCTGCTGdGh HOCOMOCOv11 ChIP-Seq 0.502 0.98 4 4 500 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 106679 ZIC2_MOUSE Q62520
ZIC3_MOUSE.H11MO.0.A MOUSE:Zic3 15 A 0 dvvbhCCTGCTGdGn HOCOMOCOv11 ChIP-Seq 0.943 5 170 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 106676 22773 ZIC3_MOUSE Q62521
ZKSC1_MOUSE.H11MO.0.A MOUSE:Zkscan1 19 A 0 dvhdbhCCTACTRWGYGYh HOCOMOCOv11 ChIP-Seq 0.961 6 500 More than 3 adjacent zinc finger factors{2.3.3} ZNF24-like factors{2.3.3.10} 1921820 74570 ZKSC1_MOUSE Q8BGS3
ZN148_MOUSE.H11MO.0.D MOUSE:Znf148 15 D 0 dSvKbGGGGGhGGGR HOCOMOCOv9 Integrative 34 More than 3 adjacent zinc finger factors{2.3.3} ZNF148-like factors{2.3.3.13} 1332234 22661 ZN148_MOUSE Q61624
ZN281_MOUSE.H11MO.0.A MOUSE:Znf281 15 A 0 RvRKKGGGGGAGGGG HOCOMOCOv11 ChIP-Seq 0.938 0.999 7 3 502 More than 3 adjacent zinc finger factors{2.3.3} ZNF148-like factors{2.3.3.13} 3029290 226442 ZN281_MOUSE Q99LI5
GLI1_MOUSE.H11DI.0.B MOUSE:Gli1 17 B 0 nvnnbSTGGGTGGYChn HOCOMOCOv11 ChIP-Seq 0.671 0.953 2 3 501 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 95727 14632 GLI1_MOUSE P47806
OVOL2_MOUSE.H11DI.0.C MOUSE:Ovol2 11 C 0 ndndTAACGGd HOCOMOCOv11 ChIP-Seq 0.454 0.963 2 2 185 More than 3 adjacent zinc finger factors{2.3.3} OVOL-factors{2.3.3.17} 1338039 107586 OVOL2_MOUSE Q8CIV7
PRDM1_MOUSE.H11DI.0.A MOUSE:Prdm1 17 A 0 ddRMAGKGAAAGTdhnn HOCOMOCOv10 ChIP-Seq 0.982 0.959 12 9 501 More than 3 adjacent zinc finger factors{2.3.3} PRDM1-like factors{2.3.3.12} 99655 12142 PRDM1_MOUSE Q60636
ZIC2_MOUSE.H11DI.0.C MOUSE:Zic2 17 C 0 ndRhhhCCTGCTGdGhn HOCOMOCOv11 ChIP-Seq 0.511 0.987 4 4 508 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 106679 ZIC2_MOUSE Q62520
ZIC3_MOUSE.H11DI.0.A MOUSE:Zic3 18 A 0 nndShbhCCTGCTGdGhn HOCOMOCOv11 ChIP-Seq 0.953 5 226 More than 3 adjacent zinc finger factors{2.3.3} GLI-like factors{2.3.3.1} 106676 22773 ZIC3_MOUSE Q62521
ZKSC1_MOUSE.H11DI.0.A MOUSE:Zkscan1 21 A 0 ndvhdbhCCTACTRWGTGYhn HOCOMOCOv11 ChIP-Seq 0.969 6 476 More than 3 adjacent zinc finger factors{2.3.3} ZNF24-like factors{2.3.3.10} 1921820 74570 ZKSC1_MOUSE Q8BGS3
ZN281_MOUSE.H11DI.0.A MOUSE:Znf281 18 A 0 vdbdGGGGGAGGGGvvvv HOCOMOCOv11 ChIP-Seq 0.942 0.999 7 3 423 More than 3 adjacent zinc finger factors{2.3.3} ZNF148-like factors{2.3.3.13} 3029290 226442 ZN281_MOUSE Q99LI5